Neotabrizicola shimadae: JO391_07875
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Entry
JO391_07875 CDS
T08148
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm00550
Peptidoglycan biosynthesis
nsm01100
Metabolic pathways
nsm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JO391_07875
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JO391_07875
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nsm01003
]
JO391_07875
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nsm01011
]
JO391_07875
Enzymes [BR:
nsm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
JO391_07875
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JO391_07875
Glycosyltransferases [BR:
nsm01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
JO391_07875
Peptidoglycan biosynthesis and degradation proteins [BR:
nsm01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
JO391_07875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
QYZ71404
UniProt:
A0A8G0ZVU2
LinkDB
All DBs
Position
complement(1638319..1640880)
Genome browser
AA seq
853 aa
AA seq
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MIRFVTSFFGALFTFVTLGLFAVALSIGAILYIYSRDLPSHESLAQYAPPTISRIYSGEG
RIIDEFAQERRLFVPIEDIPPLVKDAFIAAEDKNFYQHHGYDVTGMAAAFRDAVISRGQN
LRGASTITQQVMKNFLLSGDRTGERKVKEIILASRLEETLSKDKILELYLNEIFLGQNSY
GVAAAAQTYFNKPLTELTPAEAAYLATLPKAPSEMHPVRNKDRALERRAYVLNRMAEDGY
ITAEVAAAEAATPLLTVQNGDFPAFRQALPPRSYFTDEIRRQLSGTFGEEEFFGGGLSIR
ATVDSELQAQAAKALQAGLEKYDRGIGVWRGTGKTIDPAKLGSQADWRAALAETEVPRDI
VGWYPAVVLEVGESSARIGIEGVEEDEDGHFIPADDVTWARKRLADGKLGPKAKRAGDLV
EVGDVVLVRAVTNDDDGSFVRWSLRQVPEIEGAFMAMDVNTGRVLAMQGGFSYQSSVYNR
TTQAQRQPGSSFKPFVYAAALDSGFTPATIVVDAPIEVNTPQGLWRPKNASNKFYGPTPL
RTGIEQSRNLMTVRIAQEIGMETVAAYAERFGVYNPMKPFLANALGAQETTLFKMVAAYA
MFANGGERVEPTLVDRVQDRFGRTIYRHDARECEDCQLASLDAGAGLDIISRRERVMDPI
TAYQLTSMMEGVVQRGTAASIKLPVPVAGKTGTTNDAKDVWFIGFTSNIVAGCYIGFDQP
RSLGDRASGGGMCAPVFQSFMKTAIKKYGGTEFRVPPGGYFLKIDRFTGARLSDDASGAN
VVAEYFREGEEPVFGAAALVDGGFAMGSNLPLYAYGEGGSDEGDMSVTTSTGETAVIPKN
KASYGTISSGGLY
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
ttgatccggttcgtcacgtccttcttcggtgcgctcttcaccttcgtgacgctcggcctc
ttcgccgtcgcgctcagcatcggcgcgatcctctacatctactcgcgcgacctgcccagc
cacgaaagcctcgcgcaatacgcgccgcccaccatcagccgcatctactccggcgaaggc
cgcatcatcgacgaattcgcccaggaacgccgcctcttcgtcccgatcgaggatatcccg
cccctggtgaaggacgccttcatcgcggccgaggacaagaacttctaccagcaccacggc
tatgacgtgaccggcatggccgccgccttccgcgatgccgtcatcagccgcggccagaac
ctgcgcggcgcctccaccatcacccagcaggtgatgaagaacttcctcttgtccggcgac
cgcacgggcgaacgcaaggtcaaggaaatcatcctcgcctcgcggctggaagaaacgctc
tccaaggacaagatcctcgaactctacctgaacgagatcttcctcgggcagaactcctat
ggcgtggccgccgccgcccagacctatttcaacaagccgctgaccgaactcacgccggcc
gaggccgcctatctggcgaccctgcccaaggcgccgtcggaaatgcacccggtgcgcaac
aaggaccgcgcgctggaacgccgcgcctatgttctcaaccgcatggccgaagacggctac
atcaccgccgaggtcgccgccgccgaagccgcgacgccgcttctcaccgtgcagaacggc
gatttccctgcgttccgccaggccctgccgccgcgcagctacttcaccgacgaaatccgc
cgccagctttcgggcaccttcggcgaagaggaattcttcggcggcggcctgtcgatccgt
gccacggtggacagcgagcttcaggcccaggccgccaaggcgcttcaggcggggctcgaa
aaatacgaccgcggcatcggcgtctggcgcggcaccggcaagaccatcgacccggcgaag
ctcgggtcccaggccgactggcgcgcggcgctcgccgaaaccgaagtcccgcgcgacatc
gtcggctggtatcccgctgtcgtgcttgaggtcggcgaaagctcggcccgcatcggcatc
gagggcgtggaagaagacgaggacggccatttcattcccgccgacgatgtcacctgggcg
cgcaagcgcctggccgatggcaagctcggccccaaggccaagcgcgcgggcgacctcgtc
gaggttggcgatgtcgtcctggtccgtgccgtcaccaatgacgacgacggcagcttcgtg
cgctggtcgcttcgccaggtgcccgagatcgagggcgccttcatggcgatggatgtgaac
accggccgcgtgctcgccatgcagggcggcttctcctaccagtcctcggtctacaaccgc
accacccaggcacagcgccagcccggctcgtccttcaagcccttcgtctatgccgcggcg
ctggattccggtttcactccggccaccatcgtggttgacgcgccgatcgaggtgaacacg
ccccagggtctctggcgcccgaagaacgcctccaacaagttctacggccccacgccgctg
cgcaccggcatcgaacagtcgcggaacctgatgaccgtgcggatcgcgcaggaaatcggc
atggaaaccgtggccgcctatgccgaacgcttcggggtctacaacccgatgaagcccttc
ctcgccaacgcgctcggtgcgcaggaaaccacgctgttcaagatggttgctgcctatgcc
atgttcgccaatggcggcgagcgggtggaacccacgctggtcgaccgcgtgcaggaccgc
ttcggccgcaccatctatcgccacgacgcccgcgaatgcgaggattgccagcttgccagc
ctcgacgccggcgccgggctagacatcatctcgcgccgcgaacgggtgatggacccgatc
accgcctatcagctcacctccatgatggaaggcgtggtccagcgcggcaccgcggccagc
atcaagctgcccgtgcccgtggcgggcaagaccggcaccaccaacgatgccaaggacgtc
tggttcatcggcttcacctcgaacatcgtggccggctgctacatcggcttcgaccagccg
cgcagcctgggtgaccgcgcttcgggtggcggcatgtgcgcgccggtgttccaaagcttc
atgaagaccgcgatcaagaaatacggcgggaccgaattccgcgtgccgccgggcggctac
ttcctcaagatcgaccgcttcaccggcgcccggctctccgacgatgcctcgggcgccaac
gtcgtggccgaatacttccgcgagggcgaagagccggtcttcggcgccgcggccctcgtg
gacggcggcttcgccatgggctccaacctgccgctttatgcctatggcgaaggtggcagc
gatgaaggtgacatgtccgtcaccacctccacgggcgaaaccgccgtgatccccaagaac
aaggccagctacggtacgatctcctccggcggtctctattga
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