Neotabrizicola shimadae: JO391_08025
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Entry
JO391_08025 CDS
T08148
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JO391_08025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsm03400
]
JO391_08025
Enzymes [BR:
nsm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
JO391_08025
DNA repair and recombination proteins [BR:
nsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
JO391_08025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QYZ71432
UniProt:
A0A8G0ZWI0
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All DBs
Position
complement(1670795..1672363)
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AA seq
522 aa
AA seq
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MALFEDPIPHEPSSGNQPEFTVSELSGAVKRVIEGEFGLVRVRGEVGRVSRPSSGHLYFD
LKDGQAVLAAIAWKGQATRLRQPPEEGLEVVATGRLTTFPGQSKYQMIVEDLALAGAGAL
MAMLEKRKAQLQAEGLFDPARKKPIPYLPRVIGVVTSPSGAVIRDILHRLRDRFPRPVLI
WPVAVQGANCAAEVAAAIRGFNALPEGGPIPRPDVLIVARGGGSIEDLWGFNEEAVVRAA
AESRIPLISAVGHETDTTLIDFAADLRAPTPTAAAELAVPVRLDLVATLDGFSARQSQAL
AAAMRRRDERLRDLTRALPRPEALVQAPAQRLDLVSGRLAQALATRIARARGRFDPAAAL
LRPRILADLSRRLQDRLAERGRSLDATQDRRAERARDRLAALSARLDGGLARLVTGAARD
VARARADLAALDARREAAQASRLARLSDRLDALDRMRTTLGPTETLKRGFAIVRGDGHVV
TGKGAAERATALEIEFHDGRLSLAPKPPRRKGGGEAAQGSLF
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atggcccttttcgaagaccccatcccgcatgagccttcttcgggcaaccagccggaattc
accgtctccgagctttccggcgccgtgaagcgggtcatcgagggagagttcggccttgtc
cgggtgcgcggcgaagtcgggcgcgtgtcaaggccgagttcgggccatctctacttcgac
ctcaaggacggccaggccgttctggccgccatcgcctggaagggccaggccacccgtctg
cgccagccgccggaagaggggctggaggtcgtggcgaccgggcggctcaccaccttcccc
ggccagtccaaataccagatgatcgtcgaggatctggcattggccggcgctggcgcgctg
atggccatgctggaaaagcgcaaggcgcaactgcaggccgagggcctgttcgatcccgcc
cgcaagaagcccatcccctacctgccgcgcgtgatcggggtcgtcacctcgccctcgggt
gccgtgatccgcgatatcctgcaccgcctgcgcgaccgcttcccgcgccccgtgctcatt
tggccggtggccgtacaaggcgcgaattgcgcggccgaggtcgccgccgccatccgcggc
ttcaacgccctgcccgagggcggcccgatcccgcgtcccgatgtgctgatcgtcgcgcgc
ggcggcggctccatcgaggatctctggggcttcaacgaggaagccgtcgtccgcgccgcc
gccgaaagccgcatcccgctgatctcggccgtgggccacgaaacagacacaacgctcatc
gacttcgccgccgacctgcgcgcacccacccccaccgccgccgccgaactggcggttccc
gtgcggctggaccttgtggccacgcttgatggcttctccgcccgccagagccaggcgctg
gccgccgccatgcgccgccgtgatgaacgcctgcgcgatctgacccgcgccctgccgcgc
cccgaggccctggtgcaggccccggcgcagcggctcgatcttgtctcgggccggctggcc
caggccctggccacccgcatcgcccgcgcgcgcggccgcttcgaccctgccgccgcgctc
ctgcgcccgcgcatcctcgccgacctctcccggcgtctccaggaccgacttgccgaacgt
ggccgcagcctcgacgccacccaggaccgccgcgccgaacgcgcccgcgaccgtctggcc
gcgctctccgcccgtctggacggcggcctcgcccgccttgtcaccggcgccgcccgcgac
gttgcccgcgcccgtgccgacctggctgccctggatgcccggcgcgaggcggcacaggcc
agccgcctcgcccgcctgagcgaccggctggatgccctggacaggatgcgcaccacgctc
ggcccgaccgagacgctgaagcgcggcttcgccatcgtccggggcgacggccatgttgtc
accggcaagggtgccgccgaacgcgccaccgcgctggagatcgagttccacgatggacgc
ctgtccctcgcgcccaagcccccccgccgcaaaggcggcggcgaagcggcgcagggcagc
ctgttctag
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