Neotabrizicola shimadae: JO391_08380
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Entry
JO391_08380 CDS
T08148
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
nsm
Neotabrizicola shimadae
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
nsm03029
]
JO391_08380 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nsm02000
]
JO391_08380 (bamA)
Mitochondrial biogenesis [BR:
nsm03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
JO391_08380 (bamA)
Transporters [BR:
nsm02000
]
Other transporters
Pores ion channels [TC:
1
]
JO391_08380 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POTRA
Omp85
POTRA_1
Motif
Other DBs
NCBI-ProteinID:
QYZ71501
UniProt:
A0A8G1EEL1
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All DBs
Position
complement(1747671..1750016)
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AA seq
781 aa
AA seq
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MREADKGFPSRGAGLPIGLVLQVLAVIAFALVLSLPGRSALAQTFSFTTVRVEGSTRVDV
PTVLSYAGIKSGQELTPGALNDATQRIVESGLFATVELVPEGSTLVIKVTENPMIDVINF
EGNKRIKDEDLSAIIKSKQRTVYSAGLAQADAQAIAETYRMRGRFAATVTPQIIPKGDNR
VDLVFEITEGKVTEVERLTFNGNRAFSDRALRQVLETKQAGLLRQVIQRDTYIAERLELD
KQLLTDFYNSRGYIDFQVLDASADVVRERDGVFVTFTIQEGQQYRIGSVDAVSEIEGVDI
ADFANVLKLRPGAVYSPALIDNNVTRLETLAVRKGLNFVRVDPRIVRDSANQTLGVTFAL
VKGPRIFVERIDIEGNTTTLDEVVRRQFRTAEGDPFSPREIKQASERIRALGYFEDAQVE
SRPGSTPDQVIVNVDVIEKPTGSLSFGASYSTNSGVGITIGFSEDNFLGRGQALSFDIEA
GTDNTNVNFSFAEPAFLGKDLRFGFDAWWNTSDYYDAYYNTSDAGVRLSVGFPISTITRL
NFNYSLSQSEITDVSEDSSVILQEEEAMGMLTSSAFGYALNLDTRREGLDPVTAYVMRWD
QSYAGIGGDTNFVDSNFYGAVQTKLFQDDVTVRAIAQSGVFTALGDYTSRVTDRYFANGK
IRGFERNGIGPRDLAAINQDALGGNYYGVVSLEADFPVGLPEEYGVGGGLFLDVGSVWGL
DNNIGTDGVPVDDDMYLRVTTGVIVYWTTPLGPLKFTFSKALQKESYDKTQPFDFSIATS
F
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaagcggacaagggttttccatcgcgcggtgctggtttgccgatcggtttggtc
ctgcaagtgctcgccgttattgcgtttgcactggttctttcgcttccaggccggtctgcg
ctggcacagaccttctcttttaccacggtccgcgtcgaaggcagcacccgggttgatgtc
ccgaccgtgctctcctacgcgggaatcaagtcgggccaggaactgacacccggcgccttg
aacgacgcgacgcagcgcatcgtcgaatccggcctgttcgccacggtcgaacttgtgccc
gagggcagcaccctggtcatcaaggtgaccgagaacccgatgatcgacgtcatcaatttc
gagggcaacaagcgcatcaaggacgaggatctctcggccatcatcaagtcgaagcagcgc
accgtctattccgccggcctggcccaggccgatgcccaggccatcgccgaaacctatcgg
atgcgtggccgcttcgccgccacggtgacgccgcagatcatccccaagggcgacaaccgc
gtcgacctcgtgttcgagatcaccgagggcaaggtcaccgaagtcgaacggctcaccttc
aacggcaaccgcgccttctcggaccgcgccctgcgccaagtgctggaaaccaagcaggcc
ggcctcctgcgccaggtcatccagcgcgacacctacatcgccgagcgcctggaactcgac
aagcaactgctgaccgatttctacaactcgcgcggctacatcgacttccaggttctggat
gccagcgccgatgtcgtacgcgagcgggacggcgtctttgtgaccttcaccatccaggaa
ggccagcagtaccgcatcggctcggtcgatgccgtgtccgaaatcgaaggcgtcgatatc
gccgactttgctaatgtgctgaagctgcggcccggcgcggtctattcacccgcgctgatc
gacaacaacgtgacccggctggaaaccctggccgtgcgcaaggggctgaacttcgtgcgt
gtcgatccgcgcatcgtgcgcgattctgccaaccagacgcttggcgtgacctttgccttg
gtgaaagggccgcgcatctttgtcgaacgcatcgacatcgagggcaatacgacgacgctg
gacgaggtggtgcgccgccagttccgcacggccgaaggcgaccccttctccccgcgcgaa
atcaagcaagcctctgaacgtatccgcgcgcttggctatttcgaggacgcccaggtggaa
tcgcgtcccggctcgacacccgaccaggtgatcgtgaacgtggacgttatcgaaaagccc
accggttcgctcagcttcggcgcaagctactccaccaactcgggtgtcgggatcaccatc
ggcttctcggaagacaacttccttggccgtggacaggcgctgtcattcgacatcgaggcc
gggaccgacaacacgaacgtcaacttcagctttgccgaacctgccttcctgggcaaggat
ctgcgcttcggctttgacgcgtggtggaacacgtccgactattacgacgcctactacaac
acctccgatgccggcgttcgcctttcggtgggcttcccgatcagcacgatcacccggctg
aacttcaactactccctgtcgcaaagcgagattaccgacgtcagcgaagactcctccgtc
atcctgcaagaggaagaggcgatggggatgctgaccagctcggccttcggctatgccctc
aacctcgatacccgccgcgaagggctggacccggtcaccgcctatgtgatgcggtgggac
cagtcctatgccggcatcggcggcgacacgaacttcgtggacagcaacttctatggcgcc
gtgcagaccaaactgttccaggatgatgtgaccgtccgcgccatcgcgcaatcgggcgtg
ttcaccgcacttggcgactatacctcgcgcgtgaccgaccgctattttgccaacggcaag
atccgcggcttcgaacgcaacggcatcggcccgcgcgacctggccgcgatcaaccaggac
gccctgggcggcaactactacggcgtggtcagcctcgaagccgacttccccgtgggcctg
cccgaggaatacggcgtcggcggcggcctgttcctcgacgtgggctcggtctggggtctt
gacaacaacatcggcaccgatggggtcccggtggatgacgacatgtacctgcgtgtgacc
acgggtgtgatcgtctattggacgaccccgctcggaccgctgaagttcaccttctcgaag
gcgctccagaaggaatcctacgacaagacgcagccgttcgacttctccatcgcaacctcg
ttctga
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