Neotabrizicola shimadae: JO391_08430
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Entry
JO391_08430 CDS
T08148
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JO391_08430
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nsm02000
]
JO391_08430
Transporters [BR:
nsm02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
JO391_08430
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
DUF4813
Motif
Other DBs
NCBI-ProteinID:
QYZ71509
UniProt:
A0A8G0ZW08
LinkDB
All DBs
Position
1758197..1759897
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AA seq
566 aa
AA seq
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MTKMTRVDQGLHPAAHMYADEVARGELSRREFLARTTALGVSAAAAYALIGAPMPAAAQE
TPKEGGTLRMSMELKALKDPRTADWSQIANYTRGWLEYLVEYNNDGSVRGMLIESWSANA
DATEYTLKVRPGVKWSNGDDFTADDVANNILRWCDGSVEGNSMASRMESLCDPVTVTKPD
PADATKTIEASILKPREGAVTVVDPMTVLLKLKAPDITIIVGMADYPAAVVHKSYDNGDP
VANAIGTGPYMPDGFEVGVKAALKKSDQPWWGTAVYGGPYLDRVEYIDLGTDPSAEVAAA
GSGEIDAVYQSVGDFIPQLEALGWPTSEAVTAATLAVRFNQQAEEYKDVNVRVGLVKCVD
NKVVLELGYNNLGTPAENHHVAPIHPEYFPLPPLTPDPAAGLKMVQDAGKGDFEFELISL
DDAWQAATCDAVAAQIRDAGIKIKRTVLPGSTFWNDWLKYPFSATEWNMRPLGVQVLALA
YKSGVAWNESAFANPEFDELLTKAMSIADAGERSKVMERIEQIMQEQGVMVQPYWRSIYR
NADAKVMGCEMHATFEHHHYKWWINA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagatgacacgggtggatcagggcctgcatcccgccgcccacatgtatgccgac
gaagtcgcccggggcgaacttagccggcgcgaattccttgcccgcactactgctctgggc
gtctcggctgctgcggcctatgcgctgatcggcgcaccgatgcccgccgccgcgcaggag
acgccgaaagaaggcggcacgctgcgcatgtcgatggagctgaaggcgctgaaggatccg
cgcaccgcggactggagccagatcgccaattacacccgcggctggctggaatacctggtc
gagtacaacaacgatggctcggtccgcgggatgctgatcgaaagctggtcggccaatgcc
gatgcgaccgaatacacgctgaaggttcgtccgggcgtgaagtggtcgaatggcgatgac
ttcactgccgatgacgtggccaacaatatcctgcgctggtgcgacggctcggtcgagggc
aactcgatggcgtcgcgcatggaatcgctgtgcgacccggtgacggtaaccaagcccgac
cccgccgatgcgaccaagacgatcgaggcctcgatcctgaagccccgtgagggcgcggtg
acggtggtcgatccgatgaccgttctgctgaagctgaaggcgcccgacatcaccatcatc
gtcggcatggccgactatccggccgccgtggtgcacaagtcctatgacaacggcgatccc
gtcgccaacgccatcggcaccggcccatacatgcccgacggcttcgaggtcggcgtgaag
gccgcgctgaagaaatccgaccagccctggtggggcaccgccgtctatggcggcccctat
ctggaccgtgtggaatacatcgaccttggcaccgacccctcggccgaagtggccgcggcc
ggttcgggcgagatcgacgccgtctaccagtcggtcggcgacttcattccgcaactggaa
gccctgggatggccgacctcggaagccgtgaccgccgccaccctggccgtgcggttcaac
cagcaagccgaggaatacaaggacgtgaacgtccgcgtgggcctcgtgaaatgcgtggac
aacaaggtcgtgctggaactcggttacaacaacctgggcaccccggcggaaaaccaccat
gtcgcgccgatccacccggaatacttccctctgccgcccctgacccccgatccggccgcc
ggcctgaagatggtgcaggatgccggcaagggcgatttcgagttcgagctgatttcgctg
gatgacgcctggcaggcggcaacctgcgacgccgtggccgcccagatccgcgacgccggc
atcaagatcaagcgcaccgtgctgccgggctcgaccttctggaacgactggctgaagtac
ccgttctcggcgaccgaatggaacatgcgcccgcttggcgtgcaggttcttgccctggcc
tacaagtcgggtgtggcctggaacgaaagtgccttcgccaaccccgagttcgacgagctg
ctgaccaaggccatgtcgatcgccgatgccggcgaacggtccaaggtgatggagcggatc
gagcagatcatgcaggaacagggcgtcatggtgcagccctactggcgctccatctaccgc
aatgccgatgccaaggtcatgggctgcgagatgcacgccaccttcgagcatcaccactac
aagtggtggatcaacgcctga
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