Neotabrizicola shimadae: JO391_08595
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Entry
JO391_08595 CDS
T08148
Name
(GenBank) helicase
KO
K17675
ATP-dependent RNA helicase SUPV3L1/SUV3 [EC:
5.6.2.6
]
Organism
nsm
Neotabrizicola shimadae
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
nsm03029
]
JO391_08595
Enzymes [BR:
nsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
JO391_08595
Mitochondrial biogenesis [BR:
nsm03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
JO391_08595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEXQc_Suv3
Helicase_C
DEAD
Motif
Other DBs
NCBI-ProteinID:
QYZ71900
UniProt:
A0A8G0ZYJ4
LinkDB
All DBs
Position
complement(1794347..1797364)
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AA seq
1005 aa
AA seq
DB search
MNGTGRVMAVLGPTNTGKTHFAIERMLTHRTGVIGLPLRLLAREVYDRVVAKVGPSVVAL
VTGEERIVPERTQYWVCTVEAMPQGIGADFVAVDEIQLCADPERGHVFTDRLLHARGLLE
TMFLGADTMRGAIAALAPGSISTRRERFSKLSYTGAKKISRMPERSAIVGFSVENVYAIA
ELIRRQKGGCAVVMGALSPRTRNAQVALYQNGDVDYLVATDAIGMGLNLDIKHVAFSSTA
KFDGRRMRQLWPQELAQIAGRAGRHTEDGTFGVTGEARPFDEEVVEQIEGHRFQPVKKLM
WRNADLDFGSAERLIRSLEAPTSNDWLSRARDADDVVALKTLSAMPEVQEKLTGPKRVQL
LWDVCRIPDFRSASETEHATLLARIFDFLVGRGIGGGRVPSDWLAKSISRIDRTDGDIDA
ISKRLAYIRTWTYVAQRKNWVEDESHWRDETRAVEDRLSDALHQRLTQRFVDRRTSVLLR
RLKQKEDLVAEVNDKGEVTVEGEFVGRLEGFRFQQDASASTDEARTLRQAAMAALKPEFS
LRADRFYNAPDTEMDFTEQGGLMWGNLAVGKLVKGADVMKPSVEPFVDEEAGFDVTEKVR
RRLQHFIDRKTAALFEPLLAMGRDEAMAGLARGVAFRLVEALGVMPREGGAAEDVKALDQ
EGRSALRKHGVRFGQYTVFLPILLKPAATRLRLVLWSLYHDLSEFPESPPPGLVTIPNLA
DVPRGHYTLAGYHPAGARAIRIDMLERLADLIRAKDSRAGFEATPEMLSITGMTLEQFAD
LMAGLGYKGEKGERPKVKPEAAAVVVEAAPEGEAVPVDGAVADGEAAEVVATEVAPVEPE
AATEQAEAALAAPVETEVFYSFTWAPKPRFERKPRFERPARTEGEGKPRGERRGDRGPRA
EGEGKPQGERRGDRPRGEAKPAEGGQAERPQGEAPQGERRGDRKGGRPHHDRKDGDRKDG
DRKGGDRNDRKPQGAKTFESRPPRPEKPIDPDNPFAVLAALKGKV
NT seq
3018 nt
NT seq
+upstream
nt +downstream
nt
atgaacgggaccgggcgggtcatggccgtgctggggccgaccaataccggcaagacccat
ttcgccatcgagcgtatgctgacgcatcgcacgggggtcatcggcctgccgctgcgtctt
ttggcgcgcgaggtctatgaccgggtggtcgccaaggtcgggccctcggtcgtggccttg
gtcacgggcgaggagcggatcgtgcccgagcggacgcaatactgggtctgcacggtcgag
gcgatgccgcagggcattggcgcggatttcgtggcggtggacgagatccagctttgcgcc
gacccggaacggggccatgtgtttactgaccggctgcttcatgcgcgcgggcttctggag
acgatgttcctgggcgccgacaccatgcggggcgccatcgctgcgctggcgccggggtcg
atttcgacgcggcgcgagcggttttcgaagctgtcctatacgggtgccaagaagatcagc
cggatgcccgagcgcagcgcgatcgtgggcttctcggtcgagaacgtctatgccatcgcc
gagctgatccgccggcagaagggcggctgcgccgttgtgatgggggcgctgtcgccccgc
acgcgcaatgcgcaggtggctttgtaccagaatggcgacgtggattacctggtggccacc
gatgccatcggcatggggctgaacctggacatcaagcatgtcgccttttcctcgaccgcc
aagttcgacgggcggcggatgcgccagctttggccgcaggaactggcgcagatcgcaggg
cgggcggggcggcataccgaagatggcaccttcggcgtgacgggagaggcacggcccttt
gacgaagaggtggtggaacagatcgagggccaccgcttccagccggtcaagaagctgatg
tggcgcaatgcggatctggatttcggcagcgccgagcggctgatccggtcgctggaggcg
ccgacctcgaacgactggctgagccgggcgcgcgatgccgatgatgtggtggcgctgaag
acgctctcggcgatgcccgaggtgcaggaaaagctgaccggtccgaagcgggtgcaattg
ttgtgggatgtctgccgcatccccgatttccggtcggccagtgaaacggaacatgcgacg
ctgctggcgcgcattttcgactttctggtggggcgcgggatcggcggggggcgggtgcct
tcggactggctggcgaagtcgatttcccgcatcgaccgtaccgatggcgacattgacgcg
atttcgaaacggctggcctatattcgcacctggacctatgtggcgcagcgcaagaactgg
gtcgaggacgaaagccattggcgcgacgaaacgcgcgctgtagaagaccgcctgtcggat
gcgctgcaccagcggctgacccagagatttgttgaccggcggacatctgttctgcttcgc
cggttgaagcagaaggaggacctcgtggccgaggtgaacgacaagggcgaagtgacggtc
gagggcgaattcgtcggccggctggaagggttccgcttccagcaggacgcaagcgccagc
accgacgaagcgcggacgctgcggcaggcggcgatggcggcgctgaagcccgagttcagc
cttcgcgccgaccggttctacaatgcgccggataccgagatggacttcaccgaacagggc
ggcctgatgtggggcaacctggcggtcggcaagcttgtgaagggcgccgacgtgatgaag
ccctcggtcgagcccttcgtggacgaggaagccggtttcgacgtgaccgagaaggtgcgc
cgccggctgcaacatttcatcgaccgcaagacggcggcgctgttcgagccgcttctggcc
atgggccgggacgaggcgatggcggggctggcgcggggcgtggccttccggctggtggag
gcgcttggcgtgatgccgcgcgagggcggggcggccgaagatgtgaaggcgctggaccag
gaaggccggtcggcgctgcgcaagcacggcgtgcgcttcggtcagtacacggtcttcctg
ccaatccttctgaagcctgcggccacccggctgcggctggtgctgtggtcgctgtaccat
gacctgtcggagttccccgaaagcccgccgccgggtctggtgacgattccgaacttggct
gatgtgccgcgcgggcattacacgctggcgggctatcacccggcaggggcgcgggcgatc
cgcatcgacatgctggaacgcctggcggacctgatccgcgccaaggacagccgggccggg
ttcgaggcgacgcccgagatgctgtcgatcaccggcatgacgctggaacagttcgccgac
ctgatggcgggtctgggctacaagggcgaaaagggcgagcggcccaaggtgaagcccgag
gcggcggcggtcgtggttgaggccgcgccggagggcgaggcggtgcctgtggacggagcc
gtggcggacggcgaggctgcagaggtggtcgcaaccgaggtggctccggtggagccggag
gccgctacggaacaggcagaggccgccctggctgcgccggtggaaaccgaggtgttctac
agcttcacctgggcgccgaagccccggttcgagcgcaagccgcggttcgagcggccggcc
cgcaccgagggcgagggcaagccgcggggcgagcgccggggcgaccgggggccgcgcgcc
gagggcgagggcaagccgcagggcgaacgccgaggcgaccgtccgcgcggcgaggccaag
cccgctgagggcgggcaggccgagcgcccgcagggggaagctccgcaaggcgagcgtcgg
ggcgaccgcaagggcgggcgtccgcatcacgaccgcaaggatggcgaccggaaggatggg
gaccgcaagggcggcgaccggaacgaccggaagccgcagggggccaagaccttcgaatcg
cgcccgccgcgccccgaaaagcccattgaccctgacaatccctttgccgttctggcggcc
ctcaagggcaaggtctga
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