Neotabrizicola shimadae: JO391_08675
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Entry
JO391_08675 CDS
T08148
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
nsm
Neotabrizicola shimadae
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsm03021
]
JO391_08675 (rpoH)
Transcription machinery [BR:
nsm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JO391_08675 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r3
UCR_14kD
Fibin
Motif
Other DBs
NCBI-ProteinID:
QYZ71551
UniProt:
A0A8G0ZUD2
LinkDB
All DBs
Position
1815173..1816069
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AA seq
298 aa
AA seq
DB search
MSTYANLPAPSPEQGLNRYMQEIRKFPLLEPEEEYMLAKRWADHQDAQAAHKLVTSHLRL
AAKIAMGYRGYGLPQAEVISEANVGLMQAVKRFDPEKGFRLATYAMWWIRASIQEYILRS
WSLVKLGTTSAQKKLFFNLRKAKAKVGALEEGDLRPENVAQIAKDLSVSEDEVIDMNRRL
AGSDASLNATVGSDGDGSTQWQDWLEDEDSNQAEAYAERDELDARRELLAQAMSVLNDRE
KDILVQRRLSEDPVTLEDLSESYGVSRERIRQIEVRAFEKLQQKMRELARGKGMAVPA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgagcacctacgcaaaccttcccgcacccagcccggaacaggggctgaaccggtacatg
caggaaatccgcaagttcccgctgctggaaccggaagaagaatacatgctggccaagcgt
tgggccgaccatcaggacgcgcaggccgcgcacaagctggtcacctcgcacctgcgcctc
gcggccaagatcgcgatgggctatcgcggctatggcctgccgcaggccgaagtcatctcc
gaggccaacgtgggcctgatgcaggcggtcaagcgtttcgatcccgaaaagggtttccgc
ctcgcgacctatgccatgtggtggatccgcgcctcgatccaggaatacatcctgcggtcg
tggagcctggtgaagctcggcaccacctcggcgcagaagaagctgttcttcaacctgcgc
aaggccaaggccaaggtcggcgccctggaagagggcgacctgcgcccggaaaacgtcgcg
cagatcgccaaggacctctcagtctcggaagacgaagtcatcgacatgaaccgccgcctc
gcgggctcggatgcctcgctgaacgcgacggtggggtccgatggcgacggctcgacccag
tggcaggactggctggaggatgaagacagcaaccaggccgaagcctatgccgaacgcgac
gaactggatgcccggcgcgagcttctggcccaggccatgtcggtgctgaacgaccgcgag
aaggatattctggtgcagcgccgcctgtcggaagatccggtgacgctggaagacctgtcg
gaaagctacggcgtcagccgcgaacgcatccgccagatcgaggtccgcgccttcgagaag
ctgcaacagaagatgcgcgagcttgcgcgcggcaagggcatggcggtgccggcctga
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