Neotabrizicola shimadae: JO391_09615
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Entry
JO391_09615 CDS
T08148
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
JO391_09615 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
nsm03011
]
JO391_09615 (rpsA)
Ribosome [BR:
nsm03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
JO391_09615 (rpsA)
Bacteria
JO391_09615 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
PCB_OB
OB_RRP5_4th
DUF3592
Motif
Other DBs
NCBI-ProteinID:
QYZ71718
UniProt:
A0A8G0ZWX3
LinkDB
All DBs
Position
complement(1993991..1995670)
Genome browser
AA seq
559 aa
AA seq
DB search
MCAKASMDEFEALLKESFEMDTPEEGSVVKGKVIAIEAGQAIIDVGYKMEGRVDLKEFAN
PGEAPSINVGDTVEVYLDRVENARGEAVVSREKARREEAWDRLEKAYASETRVEGAIFGR
VKGGFTVDLGGAVAFLPGSQVDVRPVRDAGPLMGMKQPFQILKMDRRRGNIVVSRRAILE
ESRAEQRAEVISNLYEGQVVDGVVKNITEYGAFVDLGGVDGLLHVTDMAWRRVNHPSEIL
SIGETVKVQVIKINKETHRISLGMKQLQADPWDAVERAYPIGSVHKGRVTNITDYGAFVE
LEAGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVMVLEIDSAKRRVSLGLKQTQRNPWE
VFAETHPVGSAIEGEVKNITEFGLFVGLDGDIDGMVHLSDLSWDQRGEDAIQNYRKGDVV
KAAVSEVDVEKERISLSIKALGDDTFTDAVDGVKRGGIITVAVTAIEDGGIEVEYNGAKS
FIRRSDLSRDRAEQRPERFQKGDKIDVRVTNIDPKTRRLGLSIKAREIAEEKEAVEQYGS
SDSGASLGDILGAALRDRN
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgccaaagctagcatggacgaattcgaagcccttctgaaggaaagcttcgaaatg
gacacccccgaagaaggttcggtggtgaagggcaaggtcatcgccatcgaggcgggccag
gccatcatcgacgtgggctacaagatggaaggccgcgtcgacctgaaggaatttgcgaac
cccggcgaagccccctcgatcaacgtgggcgacaccgtcgaggtctatctcgatcgcgtg
gaaaatgcccgcggcgaggccgtggtgagccgtgagaaggcccgccgcgaagaagcctgg
gaccgcctggaaaaggcctatgccagcgaaacccgcgtcgaaggcgcgatcttcggccgc
gtcaagggtggcttcaccgtggacctgggcggcgccgtggcgttcctgccgggttcgcag
gtggacgtgcgccccgtgcgcgatgcgggcccgctgatgggcatgaagcagcccttccag
atcctgaagatggatcgccgccgcggcaacatcgtcgtgtcgcgccgtgccatcctggaa
gaaagccgcgccgaacagcgcgccgaagtgatctcgaacctctacgagggtcaggtcgtg
gacggcgtggtcaagaacatcaccgaatacggtgccttcgttgacctgggcggcgtggac
ggcctgctgcacgtgaccgacatggcctggcgccgcgtcaaccatccgtcggaaatcctg
tcgatcggcgagaccgtcaaggttcaggtcatcaagatcaacaaggaaacccaccgcatc
agcctgggcatgaagcagcttcaggccgacccgtgggatgcggtcgagcgcgcctatccg
atcggttcggtccacaagggccgcgtcacgaacatcaccgattacggtgcgttcgtggaa
ctggaagcaggcgtcgaaggcctggtccacgtctcggaaatgtcctggaccaagaagaac
gtgcaccccggcaagatcgtctccacctcgcaagaggtcgacgtcatggtcctggaaatc
gacagcgccaagcgccgcgtgagcctgggcctgaagcagacgcagcgcaacccgtgggaa
gtgttcgcggaaacccatccggtgggctcggcgatcgagggtgaagtcaagaacatcacc
gaattcggtctgttcgtgggcctcgacggcgatatcgacggcatggtgcacctgtccgac
ctgtcctgggaccagcgcggcgaagacgcgatccagaactaccgcaagggcgatgtggtc
aaggccgcggtgtccgaagtggatgtcgagaaggagcgtatctcgctttcgatcaaggca
cttggcgatgacaccttcaccgatgcggtggatggcgtgaagcgcggcggcatcatcacc
gtggctgtcacggcgatcgaggacggcggcatcgaggtggaatacaacggtgccaagtcg
ttcatccgccgtagcgacctgtcgcgcgaccgggccgaacagcgccccgagcggttccag
aagggcgacaagatcgacgttcgcgtcaccaacatcgacccgaagacccgtcgtctgggc
ctgtcgatcaaggcgcgcgagatcgcggaagagaaggaagccgtggaacaatacggctcg
tccgattcgggtgcgtcgctgggcgacatcctgggcgcggccctgcgcgaccgcaactga
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