Neotabrizicola shimadae: JO391_10550
Help
Entry
JO391_10550 CDS
T08148
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm03030
DNA replication
nsm03410
Base excision repair
nsm03420
Nucleotide excision repair
nsm03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JO391_10550 (polA)
03410 Base excision repair
JO391_10550 (polA)
03420 Nucleotide excision repair
JO391_10550 (polA)
03440 Homologous recombination
JO391_10550 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsm03032
]
JO391_10550 (polA)
03400 DNA repair and recombination proteins [BR:
nsm03400
]
JO391_10550 (polA)
Enzymes [BR:
nsm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JO391_10550 (polA)
DNA replication proteins [BR:
nsm03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
JO391_10550 (polA)
DNA repair and recombination proteins [BR:
nsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
JO391_10550 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JO391_10550 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
QYZ68233
UniProt:
A0A8G1EBN2
LinkDB
All DBs
Position
2188206..2191016
Genome browser
AA seq
936 aa
AA seq
DB search
MAFGKGCHLHLIDGSAYIFRAYHALPPLTRKSDGLPVGAVAGFCNILWNELTQGKGKGTA
THIAVVFDHSARTFRTELYPLYKANRPEPPEDLRPQFPLTRDATRAFNVACLELPNYEAD
DIMATLARMAVQAGGTCTIISSDKDLMQLVGGGIDMHDPMKDRHIGPDEVFEKFGVPPEK
VVDVQSLAGDSVDNVPGAPGIGLKTAALLIQEYGDLDTLLARAGEIKQPKRRETLVDNAD
QIRLSRDLVTLKTDAPLPFTLDELEVRQPEPEKLLQFLTDMEFRTLSKRVADKLKVAAPV
IAESKGYEVAGAHEEKALETQALPFDHAAYECIRDLARLQVWTDRIRERGYVAVDTETTS
LDEMRAELVGISLSVDPGHAAYIPLGHRQGGDLFGGNALLEGQIPLAEALDALRPVLTDP
AILKIGQNMKYDWKIFARHGLRITPFDDTMLMSSAMQAGLNGHGMDELSEKYLSHRPIPI
KDLIGSGKSAITFDRVAIDTATRYAAEDADVTLRLWQAFKPQLPSRHVTTVYETLERPLV
PVLADMEMAGITVDRQVLSRMSGAFAQKMAALEEEIQGLAGQPFNVGSPKQLGEILFDKM
QLPGGEKGKTGAYGTGADVLEDLAAEGHALPARVLDWRQIAKLKSTYTDTLQEAINPETG
RVHTSYSITGAVTGRLASSDPNLQNIPVRTEEGRRIREAFVAPPGKVLVSLDYSQIELRI
LAHIADIPALQKAFRDGLDIHAMTASEMFNVPLDQMTSEIRRRAKAINFGVIYGISGFGL
SRNLRIPKAEAQGFIDRYFERFPGIKEYMSETVKFAQEKGYVQTLFGRKIHTPEINAKGP
GAGFARRAAINAPIQGTAADVIRRAMIRMPKAIADLPATMLLQVHDELLFEVEESAADTL
AQRAKEVMEGAAHPAVHLKVPLTVDSGKGPNWAAAH
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atggcattcggcaagggctgccacctgcatctcatcgacggctcggcctacatcttccgc
gcctatcacgccctgccgccgctcacgcgcaagtccgatggcctgccggtcggcgcggtg
gcgggcttctgcaacatcctgtggaacgaactcacccagggcaaaggcaagggcaccgcc
acccatatcgccgtggtcttcgaccattcggccaggaccttccgcaccgagctttatccc
ctctacaaggccaaccgccccgagccgcccgaggatctgcgcccgcaattcccgctgacc
cgcgacgccacccgcgccttcaacgtcgcctgcctcgaactgccgaactacgaggccgac
gacatcatggccaccctcgcccgcatggcggttcaggccgggggcacctgcaccatcatc
tcctccgacaaggacctgatgcagttggtgggcggcggcatcgacatgcacgacccgatg
aaagaccgccacatcggccctgacgaggtgttcgagaagttcggcgtcccgcccgagaaa
gttgtggatgtccaatcccttgccggcgattccgtcgacaacgtccccggcgcccccggc
atcggcctcaagaccgccgccctgctgatccaggaatacggcgatctcgacacgctcctc
gcccgcgcgggcgagatcaagcagcccaagcggcgcgagacactggtggacaacgccgac
cagatccgcctgtcgcgcgacctcgtcacgctcaagaccgacgcgccgctgcccttcacc
ctggacgagctggaagtccgccagcccgaaccggagaagctcctgcaattcctgaccgac
atggaattccgcacgctgtccaagcgcgtggccgacaagctgaaggttgcggcccccgtc
atcgccgaatcaaaaggctacgaagtcgccggcgcacatgaggaaaaggcgctggagacc
caggccctgcccttcgaccacgcggcctacgaatgcatccgcgatctcgcccggctccag
gtctggaccgaccgcatccgcgagcgtggctatgtcgccgtcgataccgaaaccacctcg
ctcgacgagatgcgcgccgaactggtcggcatctcgctgtccgtcgatcccggccacgcc
gcctatatccccctgggccaccgccagggcggcgaccttttcggcggcaacgccctgctg
gaaggccagatcccgctggccgaggcgctggacgcgctgcgccccgttctgaccgatccg
gccatcctgaagatcggccagaacatgaaatacgactggaagatcttcgcccgccacggg
ctgcgcatcacgcccttcgacgacacgatgctgatgtcctctgccatgcaggccgggctg
aacgggcacggcatggacgaattgtccgaaaagtacctttcccaccgcccgatccccatc
aaggacctcatcggaagcgggaaaagtgcaatcaccttcgatcgcgtcgccatcgacacc
gccacccgctatgccgccgaggatgcggacgtgaccctccgcctctggcaggcgttcaag
ccgcaactgccctccaggcatgtcaccaccgtctacgaaacgctggaacgcccgctggtc
cccgtgctggccgacatggaaatggccggcatcaccgtggaccgccaggtcctcagccgc
atgtccggcgccttcgcgcagaagatggcggcgctggaagaagagatccagggcctcgcc
ggccagcccttcaacgtgggcagccccaagcagcttggcgaaatcctcttcgacaagatg
cagcttcccggcggcgaaaagggcaagaccggcgcctatggcaccggcgccgacgttctg
gaagacctcgccgccgagggccatgcccttcccgcccgcgttctggactggcgccagatc
gccaagctgaaatccacctacaccgacacgctgcaagaggcgatcaaccccgaaaccggg
cgcgtccacacctcctactccatcaccggcgccgtcaccggccgccttgcctcgtcggac
cccaacctccagaacatccccgtccgcaccgaggaaggccgccgcatccgcgaggctttc
gtcgccccacccggcaaagtgctggtcagcctcgattattcccagatcgaactgcgcatc
cttgcccatatcgccgacatccccgccctgcaaaaggcgttccgcgacgggctggacatc
cacgccatgaccgcgtcggaaatgttcaacgtccccctcgaccagatgaccagcgaaatc
cgccgccgcgccaaggcgatcaacttcggcgtcatctacggcatctcgggcttcggcctg
tcgcgcaacctgcgcatccccaaggccgaggcacagggcttcatcgaccgctacttcgaa
cgcttccccggcatcaaggaatacatgtccgaaaccgtcaagttcgctcaggaaaagggc
tatgtccaaaccctgttcggtcggaaaatccatacgccggaaatcaacgccaaaggcccc
ggagccggctttgcccgccgcgccgcgatcaacgcgcccatccagggcaccgcggccgac
gtgatccgccgcgccatgatccggatgcccaaggccatcgccgacctgcccgccaccatg
ctcttgcaggtgcatgacgaactgctgttcgaggtcgaggaatccgccgccgacacgctc
gcccaacgcgcgaaagaggtgatggaaggcgccgcccaccccgccgtccacctgaaggtc
cccctgacggtagactccggcaaggggccgaactgggcggcggcacattag
DBGET
integrated database retrieval system
