Neotabrizicola shimadae: JO391_12630
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Entry
JO391_12630 CDS
T08148
Name
(GenBank) alanine racemase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm00300
Lysine biosynthesis
nsm00470
D-Amino acid metabolism
nsm01100
Metabolic pathways
nsm01110
Biosynthesis of secondary metabolites
nsm01120
Microbial metabolism in diverse environments
nsm01230
Biosynthesis of amino acids
Module
nsm_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JO391_12630
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JO391_12630
Enzymes [BR:
nsm01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JO391_12630
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QYZ68617
UniProt:
A0A8G0ZTS5
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Position
2600703..2601929
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AA seq
408 aa
AA seq
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MPDRHEALDRLLAEAAARFGTPAFVYVTEAIQDRLHALQSAFGRWFDLSYAVKANPNPAL
LSWLRDRVATLDISSGGELAAATSQGWAPDRLSFTGPAKRDPELAAAVAAGPVEVVLESL
REARALDRLARDAGRVQPVLVRLSPAHVPRGFGDHMAGRPSPFGIDVEEAPAALAEIAAL
PGLSLKGLHIYSGTQSLKPEAIAENWRIFLQVFRTACDGLDLVPQRLIFGAGLGIPYHEG
DTALDLEEIAAAIAPDLDAFRAEPRFAATRLTLELGRFLVGEAGWFVTRIVTLKQSRGST
FALCDGGMNAHLAASGHFGMVIKRNYRMHRVGGGEPTAKVDLTGPLCTSLDRLGSGVLLP
PLAEGDLIAIHASGAYGPTASPTGFISHPAPREVLAEGGQLREVTPRP
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgccagacaggcatgaggcgctcgacaggctgctcgccgaagccgccgcgcgcttcggc
acccccgcctttgtctatgtgaccgaggcgatccaggaccggctgcacgccctgcaatca
gctttcggtcgctggttcgacctcagctacgcggtcaaggccaaccccaaccccgcgctc
ctgtcctggctgcgcgaccgggtcgccacgctggacatctcctccggcggcgaactcgcc
gccgccacgtcccagggatgggcgcccgaccggctcagcttcaccggcccggcaaagcgc
gaccccgaactggccgccgcggtcgccgccggcccggtcgaggtggtgctggaaagcctg
cgcgaagcgcgcgcgctcgaccgcctcgcccgcgacgcaggccgggtgcagcccgtgctc
gtgcgcctttcgcccgcccatgtcccgcgcggcttcggcgaccacatggccggccggccc
agccccttcggcatcgacgtggaagaggcccccgccgcgcttgcggagatcgctgcgctg
cccggcttgtcgctgaaggggctgcacatctattccggcacgcagtcgctgaagcccgag
gccatcgccgagaactggcgcatcttcctgcaggtcttccgcactgcctgcgacggcctg
gacctcgtgccccaaaggctgatcttcggtgcgggtctcggcatcccctaccacgaaggt
gacaccgccctggacctggaggaaatcgccgccgccatcgcccccgacctcgacgccttc
cgcgccgagccgcgctttgccgccacccggctcacactggaactgggccgcttcctggtg
ggcgaggccggctggttcgtcacccgcatcgtcacgctgaaacagtcgcgcggcagcacc
ttcgcgctctgcgacggcggcatgaacgcccatctcgccgcctcgggccatttcggcatg
gtcatcaagcgcaactaccggatgcaccgcgtcggtggcggtgagcccacggcaaaagtc
gatctcaccggcccgctgtgcacctcgctcgacaggctgggctcgggcgtgcttctgccg
cctctcgccgaaggcgacctgatcgccatccacgcctccggggcctacggccccaccgcc
agccccaccggcttcatcagccatcccgccccgcgcgaagtgctggccgaaggcggccag
ctgcgcgaggtgacgccccgtccctga
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