Neotabrizicola shimadae: JO391_12750
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Entry
JO391_12750 CDS
T08148
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
nsm
Neotabrizicola shimadae
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsm03016
]
JO391_12750 (miaB)
Enzymes [BR:
nsm01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
JO391_12750 (miaB)
Transfer RNA biogenesis [BR:
nsm03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
JO391_12750 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
LuxC
Motif
Other DBs
NCBI-ProteinID:
QYZ68640
UniProt:
A0A8G0ZU14
LinkDB
All DBs
Position
complement(2623122..2624435)
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AA seq
437 aa
AA seq
DB search
MADAKKLFIKTYGCQMNVYDSERMAEAMGAEGYVLTEAVEEADMVLLNTCHIREKASEKL
YSDLGRLKPLKAARPDLKIGVAGCVAQAEGEEIIRRMPLVDLVVGPQSYHRLPALAKAPG
RSVDTEFPPEDKFDHLPERKALRGPTAFLTVQEGCDKFCAFCVVPYTRGAEVSRPVSRLM
AEAEDLVARGVCEITLLGQNVNAYHGEGPDGPWSLARLIRNLARIEGLARIRYTTSHPND
MDEDLIAAHGEVTQLMPYLHLPVQSGSDRILKAMNRKHTADQYLRLVERIRAARPDILLS
SDFIVGFPGETDQDFRQTLDLIRAVGFGAAFSFKYSSRPGTPAAERHPVDGDVADERLQL
LQALITEQQRAAQMVMVGKEVTVLYEKSGRLPGQMVGKSDHLHAVHVRDSSGQVGDLVRV
RIVGSAPNSLSGEPAIP
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcgaagaagctcttcatcaagacctatggctgtcagatgaatgtctacgac
agcgagcgcatggccgaagccatgggcgccgagggttatgtcctgaccgaggcggtggaa
gaagcagacatggtcctgctgaacacttgccacatccgcgagaaggcttccgagaagttg
tactctgatctggggcgcttgaagccgctaaaggcggctcgacccgacctgaagattggt
gttgccggttgcgtggctcaggccgaaggcgaagagatcattcggcggatgccgcttgtc
gatcttgtcgttggcccccagagctaccatcgcctgcctgccctggccaaggcgccaggc
cgcagcgtcgataccgaatttccgcccgaagacaagttcgaccacctgccggaacgcaag
gccctgcggggcccgacggcctttctgacggtgcaggagggctgcgacaagttctgcgcg
ttctgtgtcgtgccttacaccaggggggccgaggtcagccgccctgtttcccgactgatg
gccgaggcagaggatctcgtcgcgcgcggtgtctgcgagatcacgttgctaggccagaac
gtcaacgcctaccacggcgaaggccctgatggcccttggtccctggcgcgactgatacgc
aacctcgcccgtatcgaggggcttgcgcgcatccgctatacaacaagccatccgaatgac
atggacgaggacctcatcgccgcgcacggcgaagtgacccagttgatgccctacctgcat
ctcccggtgcagtccgggtcggaccggatcctgaaggcgatgaaccgaaagcacacggcc
gaccagtatctgaggctggtcgaacgtatccgcgcagcgcgcccggacatcctgctcagc
tctgatttcatcgttggcttcccgggcgaaaccgatcaggatttccggcagacgcttgac
ctgatccgtgccgtcggttttggcgcggccttcagcttcaagtactcctcccggccaggc
acccctgcggctgaaaggcatccggttgacggcgacgtcgcggatgaacggctgcaactc
ctccaggctttgatcaccgaacagcagcgcgcagctcagatggtgatggtgggcaaggaa
gtcaccgtgctctacgagaagtccgggcggcttccggggcagatggttggcaaatcggat
caccttcacgccgttcatgtccgcgactcgtcggggcaggttggagacctggtgcgggtg
cgaatcgtcggctcggcgcccaactcattgtcgggcgaaccggctatcccttga
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