Neotabrizicola shimadae: JO391_14400
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Entry
JO391_14400 CDS
T08148
Symbol
pbpC
Name
(GenBank) penicillin-binding protein 1C
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm00550
Peptidoglycan biosynthesis
nsm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JO391_14400 (pbpC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
nsm01003
]
JO391_14400 (pbpC)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nsm01011
]
JO391_14400 (pbpC)
Enzymes [BR:
nsm01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
JO391_14400 (pbpC)
Glycosyltransferases [BR:
nsm01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
JO391_14400 (pbpC)
Peptidoglycan biosynthesis and degradation proteins [BR:
nsm01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
JO391_14400 (pbpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
BiPBP_C
Motif
Other DBs
NCBI-ProteinID:
QYZ68930
UniProt:
A0A8G0ZT25
LinkDB
All DBs
Position
complement(2950313..2952352)
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AA seq
679 aa
AA seq
DB search
MRARLIFSVAAGLFLAAFARDRADLWIDFTVLPPLALETSTEVRARDGTLLRAYTVADGR
WRLATDSGSVDPAYVTMLVDYEDGRFYSHPGVDPLSLIRAAGQAAWNGRVVSGGSTLTMQ
VARLLEDSGTGQMTGKLRQMRVALALERRLTKDQILGLYLHLAPFGGNLEGVRAASFAYF
GKEPRRLTPAEAALLVAIPQAPESRRPDRSLAAAHAARDRVLARATRDGILDADEARAAL
TEPVPAARKAFPLFAPHLADRLTAAAPAKHLHMTTLDAVLQASLEQLATQTVSASGERLQ
VAIVAADHKTGELLASVGSAGYQADARQGFVDMAVALRSPGSTLKPLIYGLAFSEGLAHP
ETLLEDRPTSFNGYAPQNFDKTWHGTIRAREALQQSLNLPVVALLDALGPARLLVALDRA
GATAVVPGDQPGLATALGGLGISLTDMVQIYAAIARGGVSLPLTAELDGARSEGQRLMTP
AAAWQVGDVLAGLPPPPGAPQNRLAYKTGTSYGHRDAWAIGFDGRHVIGIWLGRADGTPV
PGAFGADLAAPVLFQAFGRLKPALDPRPPAPADTLLVANAALPQPLRHFRPRGAALDAPA
DAPAVTFPPDGAEVELLAGALKVKVQGGTAPFTWLANGAPVVTGLSSREALLDVPGPGFV
TLSVIDAEGRSARTSVRLW
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcgcgcctgatcttctctgtggcggcggggctgttcctcgccgcctttgcgcgc
gacagggccgacctttggatcgacttcactgtgctgccgccccttgcgctggagacttcc
accgaggtccgcgcccgcgacgggacactgcttcgtgcctacaccgtggctgacgggcgc
tggcggctggcgaccgacagcggctcggtggatccggcctatgtcaccatgctggtcgat
tatgaagacggacggttctacagccatcccggcgtcgatcctctgtcgctgatccgggcg
gcggggcaggccgcctggaacggtcgcgtggtttccgggggatcgaccctgaccatgcag
gtggcgcgcctgctggaggacagcggtaccggacagatgaccggcaaactgcgccagatg
cgtgtcgcgctggcgttggagcggcgtctgaccaaggatcagattcttggcctctacctg
catctcgccccgttcggtggcaaccttgaaggcgtgcgggcggccagtttcgcctatttc
ggcaaggagccacgccggcttaccccggcagaggcggcgcttctggtggccattccccaa
gcgccggaatcccgccgcccagaccgcagcctggccgccgcccatgccgcgcgcgaccgc
gtgctggcccgcgccacacgcgacggcatcctggatgccgacgaggctagggcggcgctg
accgagcctgtgccggccgcgcggaaggcctttcctctcttcgcaccccatctggcggac
cgcctgacggcggcggcgccggccaagcacttgcacatgaccacgctggacgctgtcctg
caggccagcctcgaacaactggccacacagacagtctccgcttcgggcgaacgcctgcag
gttgccatcgtcgcggccgaccacaagaccggagagctgctcgcctccgtcggctcggcc
ggttatcaggccgatgcccgccagggctttgtggacatggcggttgcgttgcgttcgccc
ggatcgacgttgaagccgctgatctatggccttgcattttcagagggcctggcccatccc
gagactctgttggaggaccgcccgaccagtttcaacggctatgcgccgcagaactttgac
aagacctggcacggcacgatccgcgcgcgcgaggccctgcagcaatcgttgaacctgccg
gtggtggcgctgctggatgcgcttggacctgccaggcttctggtggcactggatcgcgca
ggcgcgaccgccgtcgtgccgggcgaccagccgggactggccaccgcacttggtggcctt
gggatctcgctgaccgacatggtgcagatctatgcggccattgcgcggggcggggtgtcc
cttccccttactgcagaacttgatggggcccgaagcgagggtcagcgcctgatgacaccc
gccgctgcctggcaggtgggcgacgttttggcaggcctgccaccgccgcccggcgccccg
cagaaccggctcgcctacaagacaggcacgtcctacggccaccgcgatgcctgggccatc
ggctttgacggaaggcatgtgatcgggatctggctgggccgggccgatggcacgcccgtg
cccggcgcctttggtgccgatcttgccgctcccgtactgtttcaggcgttcggtcggctg
aagccggcattggacccgcggccaccggctcctgcggatactctcctggttgccaatgcc
gcgcttccgcagccactgcgccatttccgcccgcgcggtgccgcgctggatgcgccggcg
gatgcacctgcggtcactttcccgccagacggagccgaggtcgaactgctggcaggggcg
ctgaaggtgaaggtgcagggcggtacggcgcccttcacctggcttgccaacggagcgccg
gttgtgaccggcctttcgtcgcgcgaggccctgctggatgtccccggccccggatttgtg
acgctttcggtgatcgacgcagagggcaggtcggcccgcacgtcggtgcggctgtggtag
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