Neotabrizicola shimadae: JO391_14420
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Entry
JO391_14420 CDS
T08148
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JO391_14420 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsm03019
]
JO391_14420 (recQ)
03400 DNA repair and recombination proteins [BR:
nsm03400
]
JO391_14420 (recQ)
Enzymes [BR:
nsm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JO391_14420 (recQ)
Messenger RNA biogenesis [BR:
nsm03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JO391_14420 (recQ)
DNA repair and recombination proteins [BR:
nsm03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JO391_14420 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HHH
ResIII
Motif
Other DBs
NCBI-ProteinID:
QYZ68933
UniProt:
A0A8G0ZUI6
LinkDB
All DBs
Position
complement(2961360..2963426)
Genome browser
AA seq
688 aa
AA seq
DB search
MDARQPAADDRHALLARVFGFGAFRPGQEEIVAEVAAGRNVLAIMPTGGGKSLCYQLPAL
MRPGLTLVVSPLIALMRDQVRALRAAGVEAAALTSGNTEAETEEVFVAIDEGRLKLLYIA
PERLASAATLNLLRRAGTVAIAVDEAHCVSQWGHDFRPDYLRIGELRRVLGVPLAAFTAT
ADEETRAEIVARLFDGQPPATFLRGFDRPNIHLAFAVKDGPREQILSFAASRRGQSGIVY
CGTRAKTETLAQALSDAGHPAVAYHAGLEADQRREVELRFQQEDGLIVVATVAFGMGIDK
PDIRWVAHADLPKSIEGYYQEIGRAGRDGAAAETLTLYGPDDIRFRRTQIDEGLAPPERK
AADHARLNALLGLAEAQGCRRQVLLGFFGEAAEPCGNCDLCDRPPELFDATEPVRKALSA
ILRTGEWFGAGHLTDILTGNATAKVTEKGHDGLPTFGVGRDLSKAAWGAVFRQMMGLDLV
RPDPDRHGALRMTDAARPVLRGEQAVTLRRDTVRAAVSRPMVRALVGDEDAPLLSALKAK
RRALAEAQNVPAYVVFPDRTLIEMAERRPASLDEMAQISGVGAKKLESYGRLFLEVILGA
PAVELHPARMRLAGRAEGELFDRLAEAQLRLQRGEDGTEKPLSCTHTTLRHIAERRPATL
GDLARIQGMGEMKVDRFGQAFLDILRDA
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggacgccagacagcctgccgccgatgaccgccacgcgcttctggcgcgcgtgtttggc
tttggagccttccgccccggtcaggaggagatcgtcgccgaggtggccgcggggcggaat
gtgctggcgatcatgcccacgggcgggggcaagtcgctgtgctatcagttgccggcattg
atgcggccggggctgactttggtggtctcgccgctgatcgcgctgatgcgcgaccaggtg
cgggccctgcgcgcggcgggggtggaggcggctgccctgacctcgggcaatacggaggcc
gagacggaagaggtgtttgtcgccatcgacgaggggcggctgaagcttctgtacatcgcg
cctgaacgtctggcttcggccgcgacgctgaaccttctgcgccgcgccgggacggtggcg
attgccgtggacgaggcgcattgcgtgagccagtggggccacgacttccgcccggattac
ctgcgcatcggcgagttgcgccgcgtgttgggcgtgccgctggcagcctttaccgctacg
gcggacgaggaaacccgggccgagatcgtggcacgactgttcgacggccagccaccggcg
accttcctgcgcggcttcgaccggccgaacatccacctcgccttcgctgtgaaggatggc
ccgcgtgagcagatcctgtcctttgccgcctcgcggcggggtcaatcaggcattgtctat
tgcggcacgcgcgccaagaccgagacgctcgcacaggccctgtcggatgccggtcatccg
gcggtggcctatcatgccggtctggaggccgatcagcgccgcgaggtggaactgcggttc
cagcaggaagacgggctgatcgttgtggcgaccgtggccttcggcatgggcatcgacaag
cctgatatccgatgggttgcccatgccgacctgccgaaatcgatcgagggttactaccag
gagatcggccgggccgggcgcgacggggctgcggccgaaacgctgacgttgtatggcccg
gacgacatccggtttcgccggacccagatcgacgaaggcctggccccgcccgagcgcaag
gcggccgatcatgcgcggctgaacgcgcttctggggctggccgaggcgcagggatgcagg
cgtcaggtattgttgggattcttcggcgaagcggccgagccttgtggcaactgcgacctg
tgcgaccgcccgccggagctgttcgatgccaccgaacccgtgcgcaaggcactgtcggcg
atcctgcgaacgggcgaatggttcggggcagggcatctgaccgatatcctgactggcaat
gccaccgccaaggtaactgagaagggccacgacggcctgcccacctttggcgtggggcgc
gacctgtccaaggcggcctggggagcggtgttccggcagatgatggggcttgacctggtg
cgccccgatcccgaccgccacggcgccttgcgcatgacagacgctgcccgtccggttttg
cgcggcgagcaggcggttacgctgcggcgcgatacagtgagggcagcggtgtcccgtccg
atggtgcgggcgctggtgggtgatgaggatgcgccgttgctgtcggcgctgaaggccaag
cggcgtgcgttggccgaggcgcagaatgtgccggcctatgtcgtcttccccgaccgcacg
ctgatcgagatggccgagcggcgaccggcgagcctcgacgagatggcgcagatctcgggt
gtgggggcgaagaagctggaaagctatggccggctgttcctggaggtcattctgggcgcg
ccagcggtggaattgcatcctgcccggatgcggttggcagggcgggcagaaggggagttg
ttcgaccgtctggccgaggcgcagttgcgcctgcagcgcggcgaggacggcacggaaaag
cccttgtcctgcacgcacaccacgctacgccatatcgcggaacggcggccggcgacgctt
ggggacttggcccgcatccagggcatgggtgagatgaaggtggaccgtttcgggcaggcc
ttcctggacatcctgcgcgacgcctga
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