Neotabrizicola shimadae: JO391_16225
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Entry
JO391_16225 CDS
T08148
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
nsm
Neotabrizicola shimadae
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsm03016
]
JO391_16225 (truB)
Enzymes [BR:
nsm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
JO391_16225 (truB)
Transfer RNA biogenesis [BR:
nsm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JO391_16225 (truB)
Prokaryotic type
JO391_16225 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
QYZ69266
UniProt:
A0A8G1ECK2
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All DBs
Position
3344776..3345678
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AA seq
300 aa
AA seq
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MARGKKGRPVSGWVVVDKPAGVGSTAVVNKVKWAFEAQKAGHAGTLDPDATGVLAVALGE
ATKTVPYVTDALKCYRFRVAFGAATSTDDAAGEVLARSPLRPADAALEAALAGFRGDILQ
VPPRVSAVKVEGERAYDLAREGEDFELAARPLWVERLEVTGRPDADHVDLEMVCGKGGYV
RSIARDLGQVLGCLGHVAWLRRVWSGPFSVDDAVSLDEIDRLARTDEIDALVKPLELGLS
GLPELPATAEGAVRLRHGNPGMVLTSSVDYGDEAWASFQGRAVAVGTYRAGELHPARVFV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggggcaagaagggccggccggtctcgggctgggtggtggtggacaagccggcg
ggggtggggtccacggccgtggtgaacaaggtgaaatgggcgtttgaggcgcagaaggcg
ggccatgcggggacgctggacccggatgcgactggcgtgctggcggtggctttgggggag
gcgaccaagacggtgccctatgtgaccgatgcgctgaagtgctatcgcttccgggtggct
tttggcgcggcgacctcgaccgacgatgcggcgggtgaggtgctggcgcggtcgccgctg
cggccagcggacgccgcgctggaggcggcgctggcggggttccggggtgatatccttcag
gtgccgccgcgcgtgtcggcggtgaaggtcgagggcgagcgggcctatgacctggcgcgc
gagggcgaggatttcgagctggcggcgcggcccctgtgggtggagcggctggaggtgacg
gggcggccggatgcggaccatgtggatctggagatggtttgcgggaagggcggttacgtg
cggtccatcgcgcgcgacctcggccaggttctggggtgcctgggccatgtcgcctggttg
cggcgggtctggtcggggccgttctctgtggacgacgcggtgagtttggacgagatcgac
cggctggcgcggaccgacgagatcgacgcgctggtgaagcccttggagctggggctgagc
gggttgccggaactgcccgccacggcggagggcgcggtacggctgcggcatggcaatccg
ggcatggtgctgacctcttcggtggactacggcgacgaggcctgggcaagtttccagggc
cgggcggtggcggtgggaacttaccgggcgggcgagttgcacccggcgcgggtctttgtc
tga
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