Neotabrizicola shimadae: JO391_16560
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Entry
JO391_16560 CDS
T08148
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
nsm
Neotabrizicola shimadae
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nsm03000
]
JO391_16560
Transcription factors [BR:
nsm03000
]
Prokaryotic type
Helix-turn-helix
LysR family
JO391_16560
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
QYZ69327
UniProt:
A0A8G1EBF0
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Position
3417939..3418811
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AA seq
290 aa
AA seq
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MAQLNLHHLRLFRAVASDGTLTGAARGLNLSQSALSTQIKMLEASLGQDLFERQGRGLVL
TEAGRIALDHAEAIFRTADDLTATLRDTGRQRRALRVGALATLSRNFQMQFLRPLIGQPD
VEVVLRSGSQDELLRGLEGLALDVVLTNLAPATDAVSHWLVHRIDDQPVGLIGTPARVGP
VPQSLRELLASQPLILPTRETALRAAFDALATRLEVTPTLAAEVDDMAMIRLLAREDAGL
AIIPPIVVRDELGAGTLVEAARLDGISETFFAVTQRRRFPNPLLKEILRR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcccagctcaacctgcaccacctccgcctgttccgtgccgtcgcaagcgatggcacc
ctgaccggcgcggcgcgcggcctgaacctgtctcagtccgctttatctacacagatcaag
atgttagaggcttctctcggccaggaccttttcgaacgccagggccgcggcctggtgctg
accgaggccggccgcattgccctggaccatgccgaggcgatcttccgcaccgccgacgac
ctgaccgccaccctgcgcgacaccggccgccagcggcgggcgctgagggtgggggccctg
gccaccctgtcgcgcaacttccagatgcagttcctgcgccccctgatcggccagccggat
gtcgaggtcgtcctgcgctcgggttcgcaagacgagctgttgcgtgggctggaaggtctg
gcactagatgtggtgctgaccaacctcgccccagccacggatgcggtgagccactggctg
gtgcaccggatcgacgatcagccggtcggcctgatcggcacgccggccagggtgggcccg
gtgccccagtccctgcgcgagctgctggccagccagcccctgatcctgcccacccgcgaa
accgccctgcgcgccgccttcgacgcgctggcgacgcggctggaggtcaccccgaccctc
gcggccgaggtagacgacatggccatgatccgccttctggcgcgcgaggatgccgggctt
gccatcatcccgcccatcgtggtccgcgacgaactgggagccggcaccctggtcgaggcg
gcgcggctcgatgggatcagcgagaccttcttcgccgtcacccagaggcgccggttcccg
aacccgctgctgaaggaaatcctgcggcgctag
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