Neotabrizicola shimadae: JO391_16940
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Entry
JO391_16940 CDS
T08148
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JO391_16940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsm03400
]
JO391_16940
Enzymes [BR:
nsm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
JO391_16940
DNA repair and recombination proteins [BR:
nsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
JO391_16940
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
QYZ69400
UniProt:
A0A8G1EB95
LinkDB
All DBs
Position
3499713..3500501
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AA seq
262 aa
AA seq
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MPFTLATWNINSVRLRAALVSRLLAEEAPDVLCLQECKSPVDMIPTEGFHALGYTHMVAR
GQKGYNGVAILSKLPLEDTGETDFAGLGHARHVSARLPNGVTIHNCYVPAGGDIPDRDQN
VKFGQKLDYLTHLRDHFHEQRPARSILVGDLNIAPREDDVWDHKALLKIVSHTPIEVDHL
NEAREAGGWVDVTRANLPEGRLYSWWSYRSPDWNAADKGRRLDHVWATADIANAGHSSRI
LRDVRGWDQPSDHAPVFATFDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgcccttcacccttgccacctggaacatcaactcggtccgcctgcgcgcggcgctggtg
tcgcggcttctggccgaagaggcgccggacgtgctgtgcctgcaggaatgcaagtcgccg
gtcgacatgatcccgaccgaaggcttccatgcgcttggctacacgcacatggtcgcccgc
ggccagaagggttacaacggcgtcgccatcctgtcgaagctgccgctcgaagacacgggc
gagaccgatttcgccggcctgggccacgcccgccacgtctcggcccggctgcccaacggc
gtgaccatccacaactgctatgtccccgccggcggcgacatccccgaccgcgaccagaac
gtgaagttcgggcaaaagctcgactacctcacccacctgcgcgaccatttccacgaacag
cggcccgcccggtcgatcctggtgggcgacctgaacatcgccccgcgcgaggatgatgtg
tgggatcacaaggcgcttctgaagatcgtcagccacacgcccatcgaggtcgatcacctg
aacgaggcgcgcgaggccggaggctgggtcgacgtgacccgcgccaacctgcccgagggg
cggctttactcctggtggtcctaccgctcgcccgactggaacgccgcggacaagggccgt
cggctcgatcatgtctgggccactgccgacatcgccaatgcgggccattccagccgcatc
ctgcgcgatgtccggggctgggaccagccgtccgaccatgccccggtcttcgccacgttc
gatctttga
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