Neotabrizicola shimadae: JO391_17040
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Entry
JO391_17040 CDS
T08148
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
nsm
Neotabrizicola shimadae
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsm03016
]
JO391_17040 (mnmE)
Transfer RNA biogenesis [BR:
nsm03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
JO391_17040 (mnmE)
Prokaryotic type
Methyltransferases
JO391_17040 (mnmE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
ABC_tran
GCV_T
AAA_28
TniB
RsgA_GTPase
AAA_29
DUF6898
AAA_22
AIG1
GBP
SRPRB
AAA_18
Motif
Other DBs
NCBI-ProteinID:
QYZ69416
UniProt:
A0A8G1ECQ1
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All DBs
Position
complement(3518481..3519767)
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AA seq
428 aa
AA seq
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MDTIYALASARGKAGVAVIRLSGPAAHAAVAALCASPLPALRRAGLRRLSWQGDVLDEAL
VLLFPQGASYTGEESAELHLHGSSAVVAAVLRALAAQPGLRLAEPGEFTRQALENGRLDL
TQVEGLADLIDAETEAQRRQALRALDGVLGRQAAQWRESLVRAAALIEATIDFADEDVPV
DVMPEVGSLVTHVLADLRRETAGAAAAERIREGFEVAIVGPPNAGKSTLFNALAGREAAI
TSAVAGTTRDVIEVRMEIAGLAVTLLDTAGLREAEDEVERIGVSRALDRARKADLRVFLL
DEAGETEGLEPLPEDIVLRGKADTPSDGPGVSGRTGRGIPELLAAIGQRLEQRVAGAGMV
IRERQHRAMILAIKAMESAQNEIGRAPRRDELVAAHLRDAARALAMLVGRIDVEDLLGEI
FARFCIGK
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
gtggacacgatctacgccctggcctctgcccgcggcaaggccggcgtggcggtgatccgt
ttgtcgggtccggcggcccatgccgccgtggcggcgctgtgcgcatcgccactgccagcc
ctgcggcgggcgggtttgcgtcggctgagctggcaaggcgatgtgctggacgaggcgctt
gtgctcctgtttccgcagggcgccagctacaccggggaggagtcggcagaactgcatctg
cacggctcctcggcggttgtcgccgcagtgttgcgagcgcttgcggcgcagccaggcctg
cgtctcgccgaaccgggcgagttcacccgtcaggcgttggaaaacggccggcttgacctg
acccaggtcgagggcctcgcggacctgatcgacgccgagaccgaggcacaacgccgccag
gccctgcgcgccctggacggtgttctggggcgtcaggcggcgcaatggcgcgagtccctc
gtgcgcgccgcggccttgatcgaggcgaccatcgactttgcggacgaagatgttccggtc
gatgtcatgcccgaagtgggcagccttgtgacccacgtgctggccgatctgcggcgcgaa
accgcgggcgccgccgcggccgaacgcatccgcgaggggttcgaggtggccatcgtcggc
ccgccaaacgccggaaaatcaacgcttttcaatgccttggctggccgtgaagcggcgatt
acctccgcggtcgccgggacaacccgcgatgtgatcgaggtgcggatggagatcgcgggt
cttgctgtgacgcttctcgacaccgccgggctgcgcgaagccgaagatgaggtcgaacgc
atcggcgtcagccgtgcactggatcgcgcccgaaaggcggatctgcgcgtttttttgttg
gacgaggcgggagaaaccgaagggcttgaaccgctgccagaagatatcgttctgcgtggc
aaggccgacacgccgtccgatgggcccggcgtttccgggcgcacgggccggggcattcca
gagctgcttgcggccatcggtcagcggttggagcaacgtgttgccggtgccgggatggtg
atccgcgaacgtcagcaccgggccatgatccttgcaatcaaggctatggaatcggcgcag
aatgagataggcagagccccgcgccgggacgaactcgtcgctgcgcatctgcgggacgcg
gcgcgagccctggccatgttggtcggtcgcatcgacgtcgaggacctgctgggcgagatt
tttgcgcggttctgcatcgggaagtag
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