Neotabrizicola shimadae: JO391_18330
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Entry
JO391_18330 CDS
T08148
Symbol
mutS
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
JO391_18330 (mutS)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsm03400
]
JO391_18330 (mutS)
DNA repair and recombination proteins [BR:
nsm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
JO391_18330 (mutS)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_29
Motif
Other DBs
NCBI-ProteinID:
QYZ69630
UniProt:
A0A8G0ZVW1
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Position
complement(3784570..3787221)
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AA seq
883 aa
AA seq
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MSEDHSILAVTPMMAQYLEIKAEHPDALLFYRMGDFYEMFFDDAVLASEALDIALTKRGT
HLGEPIQMCGVPIHAAEGYLLTLIRKGFRVAIAEQMEDPAEAKKRGSKSVVRREVVRLVT
PGTLTEDALLEARRHNYLAAWAEVREGAALAWADISTGEMRVMPCPLVRLGPELARLAPR
EVLVSEAHERALDGVVAEAGAAMTTLSRGSFDSSGADKRLCALWGVGTLEAFGSFERAEL
SAMGALVDYLELTQRGRLPLLRAPVKESALGAMQIDAATRRNLEIVQGMSGGRDGSLLAA
VDRTVTAGGARLLERRLAAPSRDLGVIRGRLEAVRSLVEAPGLRERLRDGLRRVPDMDRA
LSRLALERGGPRDLAAVRAGLEQAGRIAAEVAGSVAVLDEAAAALVGHDALVALLDAALV
AEPPLLARDGGFIAAGYDAELDETRALRDEGRGVIARMQGEFVELTAIASLKIKHNNVLG
YFIEVTATHEDKMRSMPETFIHRQTTAGQVRFTTVKLSELETRILNAGNHALEIERRLFE
TLRAAVLERAGAVGAAARALAEVDVTAALADLAAAEGWVEPVVDESRAFDVAGGRHPVVE
RALRRQGAGPFVANDCALTPGETPAIWLLTGPNMAGKSTFLRQNALIALLAQSGSFVPAS
RARVGLVSQLFSRVGASDDLARGRSTFMVEMVETAAILNQADDRALVILDEIGRGTATYD
GLSIAWAVLEHLHGVNRCRALFATHYHEMTALAGKLDGVENATVAVKEWEGEVIFLHEVR
KGAADRSYGVQVARLAGLPMAVIERARVVLEALESGERQGGARPSALVDDLPLFRVAPAA
PPVAVKAARPSEVEARLKGVHPDELTPREALELLYELRGLMPE
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaccacagcatcttggccgtcacgccgatgatggcgcagtatctggagatc
aaggcagagcatcccgatgcgctgctgttctaccggatgggcgatttctacgagatgttc
tttgacgatgccgtgctggcctcggaggcgctggacatcgcgctgacgaagcggggcacg
catcttggcgagccgatccagatgtgcggcgtgccgatccatgcggcggagggctatttg
ctgacgctgatccgcaagggctttcgtgtcgccatcgccgagcagatggaagacccggcc
gaggcgaagaagcgtgggtcgaaatcggtggtgcggcgcgaggtggtgcggctggtcacg
cccggcacgctgaccgaggacgccctgctggaggcgcggcggcacaattacctggcggca
tgggccgaggtgcgcgagggggcggcgctggcctgggcggacatctccaccggcgagatg
cgggtgatgccctgcccgctggtgcgcctggggccggaactggcccggctggcaccgcgc
gaggttctggtttcggaggcgcatgagcgggcgctggatggggtggtggccgaggcgggc
gcagcgatgacgacgctgtcgcgggggagcttcgattcctcgggtgccgataagcggctg
tgtgcgctgtggggcgtggggacgctggaggcgttcggcagcttcgagcgggccgagctg
tcggccatgggcgcgttggtggattacctggagctgacgcagcgcgggcggctgcccctg
ttgcgcgcgccggtgaaggaatctgcgcttggcgcgatgcagatcgacgcggcgacgcgg
cggaacctggagatcgttcagggcatgtcgggcgggcgcgacggctcgcttctggccgcg
gtggaccggacggtgacggccgggggggcacgactgctggagcggcggcttgcggcgccg
tcgcgcgacctcggggtgatccggggcaggctggaggcggtgcggtcgctggtggaggcg
ccggggctgcgcgagcggttgcgcgatgggttgcggcgggtgccggacatggaccgggcg
ttgtcacggctggcgctggagcgcggggggccgcgcgacctggcggcggtgcgggcgggg
ttggagcaggccgggcggatcgcggcggaggtggcgggtagcgtggccgtgctggacgag
gcggcggcggcgctggtcgggcatgacgcgttggtggcgctgctggatgcggcgctggtg
gcggagccgcccttgctggcgcgggatggtgggttcatcgcggcgggctatgacgccgag
ctggacgagacgcgggccctgcgcgacgaggggcggggcgtgattgcgcggatgcagggc
gagttcgtcgagctgaccgcgatcgccagcctgaagatcaagcacaacaatgtgctgggg
tatttcatcgaggtcacggcgacgcatgaagacaagatgcggtcgatgcccgagaccttc
atccaccgccagaccacggcggggcaggtgcggttcaccacggtcaagctgtccgagctg
gagacgcgcatcctgaacgcaggcaaccatgcgttggagatcgagcggcggctgtttgag
acgcttcgcgcggcggtgctggagcgggcgggcgcggtgggcgcggcggcacgggcgctg
gccgaggtggatgtgacggcggcgctggccgatctggccgcggccgagggctgggtggag
ccggtggtggacgagagccgcgcctttgacgtggcgggcgggcggcatccggtggtggag
cgggccttgcggcggcagggggcggggccgttcgtggccaacgactgcgcgctcacgccg
ggagagacgccggcgatctggctgttgaccgggccgaacatggcggggaaatccaccttc
ctgcggcagaacgcgctgattgcgctgctggcgcaatcggggtccttcgtgccggcctcg
cgggcacgggtggggctggtgagccagctgttcagccgggtcggcgcttcggacgatctg
gcgcgggggcggtccaccttcatggtggagatggtggagacggcggcgatcctgaaccag
gcggatgaccgggcgctggtgatcctggacgagatcgggcggggaacggcgacctatgac
gggctgtcgatcgcctgggccgtgctggagcacttgcacggggtgaaccgctgccgggcg
ctgttcgccacgcattaccacgagatgacggcgctggccggcaagctggatggcgtggaa
aacgcgaccgtcgcggtgaaggagtgggaaggcgaggtcatcttcctgcacgaggtgcgc
aaaggggcggccgaccgcagctatggcgttcaggtggcgcggctggcggggctgcccatg
gcggtgatcgagcgggcgcgcgtggtgctggaggcgctggaatcgggcgagcgtcagggg
ggggcacggccctcggccctggtggacgacctgccgttgttccgcgtggcccccgcagcg
ccgcctgtagcggtcaaggcggcgcggccctcggaggtggaagcgcggctgaagggggtg
catccggacgagctgaccccgcgcgaggcgctggagcttctgtacgagttgcgggggctg
atgccggagtag
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