Neotabrizicola shimadae: JO391_19510
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Entry
JO391_19510 CDS
T08148
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
nsm
Neotabrizicola shimadae
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nsm03016
]
JO391_19510
Enzymes [BR:
nsm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
JO391_19510
Transfer RNA biogenesis [BR:
nsm03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JO391_19510
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QYZ69849
UniProt:
A0A8G0ZXG7
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All DBs
Position
complement(4027645..4028259)
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AA seq
204 aa
AA seq
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MTIHLHKNDLPDGLSFGPIVAIDTETMGLDPRRDRLCVVQLSAGDGSAHLVQIDRGQTRA
PNLERLLADPSVLKLFHFGRFDIAALQRAFGVRTAPVWCTKIASKLIRTFTDRHGLKYLL
QELVGVDVSKQQQTSDWGSEVLNDAQKEYAASDVLYLHQLKTELELRLKREGRMELAQRC
FDFLPTRAELDLLGWDEPNDLFHH
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
gtgaccatccacctgcacaagaacgatctgcccgacggcctgagctttggcccgatcgtg
gctatcgacaccgagaccatgggccttgacccgcgccgcgaccggctgtgcgtggtgcaa
ttgtccgcaggcgacggcagcgcccatctggtgcagatcgaccggggccagacgcgcgca
ccgaacctggaacgcctgctggccgacccttcggtgctgaagctctttcacttcggccgc
ttcgacattgcggcgctgcaacgcgccttcggcgtgcgcaccgccccggtctggtgcacc
aagatcgcatccaagctgatccgcaccttcaccgatcgccacgggctgaagtacctgttg
caggaactggtcggcgtcgatgtgtccaagcagcagcagacctcggactgggggtccgag
gtgctgaacgacgcgcagaaggaatatgccgcctcggacgtactgtacctccaccagctg
aagaccgagctggaacttcgcttgaagcgcgagggaagaatggagctggcgcagcggtgc
ttcgacttcctgcccacgcgtgccgagctggatcttcttggctgggacgagcccaatgac
ctcttccaccactga
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