Neotabrizicola shimadae: JO391_19885
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Entry
JO391_19885 CDS
T08148
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm00010
Glycolysis / Gluconeogenesis
nsm00020
Citrate cycle (TCA cycle)
nsm00260
Glycine, serine and threonine metabolism
nsm00280
Valine, leucine and isoleucine degradation
nsm00310
Lysine degradation
nsm00380
Tryptophan metabolism
nsm00620
Pyruvate metabolism
nsm00630
Glyoxylate and dicarboxylate metabolism
nsm00640
Propanoate metabolism
nsm00670
One carbon pool by folate
nsm00785
Lipoic acid metabolism
nsm01100
Metabolic pathways
nsm01110
Biosynthesis of secondary metabolites
nsm01120
Microbial metabolism in diverse environments
nsm01200
Carbon metabolism
nsm01210
2-Oxocarboxylic acid metabolism
nsm01240
Biosynthesis of cofactors
Module
nsm_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
nsm_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
JO391_19885 (lpdA)
00020 Citrate cycle (TCA cycle)
JO391_19885 (lpdA)
00620 Pyruvate metabolism
JO391_19885 (lpdA)
00630 Glyoxylate and dicarboxylate metabolism
JO391_19885 (lpdA)
00640 Propanoate metabolism
JO391_19885 (lpdA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
JO391_19885 (lpdA)
00280 Valine, leucine and isoleucine degradation
JO391_19885 (lpdA)
00310 Lysine degradation
JO391_19885 (lpdA)
00380 Tryptophan metabolism
JO391_19885 (lpdA)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
JO391_19885 (lpdA)
00670 One carbon pool by folate
JO391_19885 (lpdA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nsm04147
]
JO391_19885 (lpdA)
Enzymes [BR:
nsm01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
JO391_19885 (lpdA)
Exosome [BR:
nsm04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
JO391_19885 (lpdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_binding_2
Pyr_redox_3
FAD_oxidored
NAD_binding_8
HI0933_like
DAO
GIDA
Thi4
FAD_binding_3
AlaDh_PNT_C
3HCDH_N
Lycopene_cycl
UDPG_MGDP_dh_N
Motif
Other DBs
NCBI-ProteinID:
QYZ69916
UniProt:
A0A8G0ZR49
LinkDB
All DBs
Position
complement(4107545..4108933)
Genome browser
AA seq
462 aa
AA seq
DB search
MATFDVIIIGGGPGGYVSAIRCAQLGLKTACVEGRDTLGGTCLNVGCIPSKALLHATDSL
HEAQHNFAKMGLTGAAPTVDWSAMLGYKDDVVGQNTKGIEFLFKKNKVTWLKGWGTIPAP
GQVKVGDELHEAKAIVIATGSESASLPGVTVDEKTVVTSTGALTLGAIPKSMVVIGAGVI
GLEMGSVYARLGTDVTVIEYLDAITPGMDAEVAKSLQKILARQGLKFVLGAAVQGVETGA
KGAKVSYKLRKDDSAHDLTVDTVLVATGRRPYTAGLGLEALGVEMLPRGQVKTDDHFRTN
IPGLYAIGDAIPGPMLAHKAEDEGMAVAEIIAGKHGHVNYGVIPGVIYTTPEVASVGKTE
EQLKEEGRAYKVGKFPFMGNARAKAVFQGDGFVKILADKATDRILGCHIIGPAAGDLIHE
ICVAMEFGASAQDVALTCHAHPTFSEAVREAALACGDGAIHA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggcaacattcgacgtgatcatcatcggcggcggccccggcggctatgtctcggccatc
cgctgcgcccagctcggcctcaagaccgcctgcgtcgaaggccgcgacacgcttggcggc
acctgcttgaacgtgggctgcatcccgtccaaggcgctcttgcacgccaccgattccttg
cacgaggcgcagcacaacttcgccaaaatgggcctcaccggcgccgcgcccacggtcgat
tggtccgccatgctcggctacaaggacgatgtcgtcggccagaacaccaagggcatcgaa
ttcctgttcaagaagaacaaggtcacctggctcaagggctggggcaccatccccgccccc
ggccaggtcaaggtgggcgacgagttgcacgaggcgaaggccatcgtcatcgccaccggc
tccgaatccgcctcgctccccggcgtcacggtggatgaaaagaccgtggtcacctccacc
ggcgcgctgaccttgggcgcgatcccgaaatccatggtggtcatcggcgccggcgtcatc
ggcctggaaatgggctcggtctatgcccggctcggcaccgatgtcaccgtcatcgaatac
ctcgacgccatcacccccggcatggatgccgaggtggcaaagtcgctgcagaagatcctc
gcccgccagggcctgaaattcgtgctcggcgccgcggtgcagggcgtggaaaccggcgcc
aagggcgccaaggtctcctacaagctgcgcaaggacgattcggcgcatgacctcaccgtc
gataccgtcctcgtcgccacaggccgccgcccctataccgccgggctcggcctcgaagcc
ctgggcgtcgagatgctgccccgcggccaggtcaagaccgacgaccacttccgcaccaac
atccccggcctctatgccatcggcgatgccatccccggcccgatgctggcccacaaggcc
gaagacgagggcatggccgtggccgagatcatcgccggcaagcatggccatgtgaactac
ggcgtcatccccggcgtgatctacaccacgcccgaagtcgcctcggtcggcaagaccgaa
gaacagctgaaagaggaaggccgcgcctacaaggtcggcaagttccccttcatgggcaac
gcccgtgccaaggcggtgttccagggcgacggcttcgtgaagatcctcgccgacaaggcc
accgaccgcatcctcggctgccacatcatcggcccggcagcgggcgacctgatccacgaa
atctgcgtggcaatggaattcggcgcctcggcccaggacgtggcgctcacctgccacgcc
cacccgaccttctcggaagccgtccgcgaagccgcgctcgcctgcggcgacggcgccatc
cacgcctga
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