KEGG   Neotabrizicola shimadae: JO391_19885
Entry
JO391_19885       CDS       T08148                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
nsm  Neotabrizicola shimadae
Pathway
nsm00010  Glycolysis / Gluconeogenesis
nsm00020  Citrate cycle (TCA cycle)
nsm00260  Glycine, serine and threonine metabolism
nsm00280  Valine, leucine and isoleucine degradation
nsm00310  Lysine degradation
nsm00380  Tryptophan metabolism
nsm00620  Pyruvate metabolism
nsm00630  Glyoxylate and dicarboxylate metabolism
nsm00640  Propanoate metabolism
nsm00670  One carbon pool by folate
nsm00785  Lipoic acid metabolism
nsm01100  Metabolic pathways
nsm01110  Biosynthesis of secondary metabolites
nsm01120  Microbial metabolism in diverse environments
nsm01200  Carbon metabolism
nsm01210  2-Oxocarboxylic acid metabolism
nsm01240  Biosynthesis of cofactors
Module
nsm_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
nsm_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:nsm00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    JO391_19885 (lpdA)
   00020 Citrate cycle (TCA cycle)
    JO391_19885 (lpdA)
   00620 Pyruvate metabolism
    JO391_19885 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    JO391_19885 (lpdA)
   00640 Propanoate metabolism
    JO391_19885 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    JO391_19885 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    JO391_19885 (lpdA)
   00310 Lysine degradation
    JO391_19885 (lpdA)
   00380 Tryptophan metabolism
    JO391_19885 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    JO391_19885 (lpdA)
   00670 One carbon pool by folate
    JO391_19885 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:nsm04147]
    JO391_19885 (lpdA)
Enzymes [BR:nsm01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     JO391_19885 (lpdA)
Exosome [BR:nsm04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   JO391_19885 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_binding_2 Pyr_redox_3 FAD_oxidored NAD_binding_8 HI0933_like DAO GIDA Thi4 FAD_binding_3 AlaDh_PNT_C 3HCDH_N Lycopene_cycl UDPG_MGDP_dh_N
Other DBs
NCBI-ProteinID: QYZ69916
UniProt: A0A8G0ZR49
LinkDB
Position
complement(4107545..4108933)
AA seq 462 aa
MATFDVIIIGGGPGGYVSAIRCAQLGLKTACVEGRDTLGGTCLNVGCIPSKALLHATDSL
HEAQHNFAKMGLTGAAPTVDWSAMLGYKDDVVGQNTKGIEFLFKKNKVTWLKGWGTIPAP
GQVKVGDELHEAKAIVIATGSESASLPGVTVDEKTVVTSTGALTLGAIPKSMVVIGAGVI
GLEMGSVYARLGTDVTVIEYLDAITPGMDAEVAKSLQKILARQGLKFVLGAAVQGVETGA
KGAKVSYKLRKDDSAHDLTVDTVLVATGRRPYTAGLGLEALGVEMLPRGQVKTDDHFRTN
IPGLYAIGDAIPGPMLAHKAEDEGMAVAEIIAGKHGHVNYGVIPGVIYTTPEVASVGKTE
EQLKEEGRAYKVGKFPFMGNARAKAVFQGDGFVKILADKATDRILGCHIIGPAAGDLIHE
ICVAMEFGASAQDVALTCHAHPTFSEAVREAALACGDGAIHA
NT seq 1389 nt   +upstreamnt  +downstreamnt
atggcaacattcgacgtgatcatcatcggcggcggccccggcggctatgtctcggccatc
cgctgcgcccagctcggcctcaagaccgcctgcgtcgaaggccgcgacacgcttggcggc
acctgcttgaacgtgggctgcatcccgtccaaggcgctcttgcacgccaccgattccttg
cacgaggcgcagcacaacttcgccaaaatgggcctcaccggcgccgcgcccacggtcgat
tggtccgccatgctcggctacaaggacgatgtcgtcggccagaacaccaagggcatcgaa
ttcctgttcaagaagaacaaggtcacctggctcaagggctggggcaccatccccgccccc
ggccaggtcaaggtgggcgacgagttgcacgaggcgaaggccatcgtcatcgccaccggc
tccgaatccgcctcgctccccggcgtcacggtggatgaaaagaccgtggtcacctccacc
ggcgcgctgaccttgggcgcgatcccgaaatccatggtggtcatcggcgccggcgtcatc
ggcctggaaatgggctcggtctatgcccggctcggcaccgatgtcaccgtcatcgaatac
ctcgacgccatcacccccggcatggatgccgaggtggcaaagtcgctgcagaagatcctc
gcccgccagggcctgaaattcgtgctcggcgccgcggtgcagggcgtggaaaccggcgcc
aagggcgccaaggtctcctacaagctgcgcaaggacgattcggcgcatgacctcaccgtc
gataccgtcctcgtcgccacaggccgccgcccctataccgccgggctcggcctcgaagcc
ctgggcgtcgagatgctgccccgcggccaggtcaagaccgacgaccacttccgcaccaac
atccccggcctctatgccatcggcgatgccatccccggcccgatgctggcccacaaggcc
gaagacgagggcatggccgtggccgagatcatcgccggcaagcatggccatgtgaactac
ggcgtcatccccggcgtgatctacaccacgcccgaagtcgcctcggtcggcaagaccgaa
gaacagctgaaagaggaaggccgcgcctacaaggtcggcaagttccccttcatgggcaac
gcccgtgccaaggcggtgttccagggcgacggcttcgtgaagatcctcgccgacaaggcc
accgaccgcatcctcggctgccacatcatcggcccggcagcgggcgacctgatccacgaa
atctgcgtggcaatggaattcggcgcctcggcccaggacgtggcgctcacctgccacgcc
cacccgaccttctcggaagccgtccgcgaagccgcgctcgcctgcggcgacggcgccatc
cacgcctga

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