Neotabrizicola shimadae: JO391_21090
Help
Entry
JO391_21090 CDS
T08148
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
nsm
Neotabrizicola shimadae
Pathway
nsm00550
Peptidoglycan biosynthesis
nsm01100
Metabolic pathways
nsm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
nsm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JO391_21090 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JO391_21090 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nsm01011
]
JO391_21090 (mrdA)
Enzymes [BR:
nsm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
JO391_21090 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
nsm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
JO391_21090 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
AlkA_N
Motif
Other DBs
NCBI-ProteinID:
QYZ72201
UniProt:
A0A8G0ZZS2
LinkDB
All DBs
Position
unnamed2:53448..55400
Genome browser
AA seq
650 aa
AA seq
DB search
MRRSERDLAHAAKNTTRRSLLLGGAMSSVVGVLGFRMWQLGVRDAEQYYLLAEENRISLR
LVRPDRGRILDRAGKIVADNEQAYRITLVKEEARDVDDVLQKLRVLLGLDAETVSKVNEQ
IDRVRAFVPVTVKDRVTWDELSIVALNSPVLPGVQPEMVLSRVYPFGPDFAHQVGYVGPV
SDSDLENEAADNAPLLRLPDFEVGKTGVERIHERTLRGMPGTRRVEVNVSGRTMRELDLD
PATPGPDMQVTLDHHLQNFMRVRLEGQSAAAIVMDVTNGDLLGCTSAPSFDPNLFVRGIS
SRDYGTLRDSEFRPLADKTVQGAYPPGSTIKMSNALAALETGLMDPEETVACNGYVEISG
RRFHCWKRGGHGRVNMVGALRESCDVYFYEVAQRIGIDGIFAMNDRLGLGQKYDLPLSGM
AHGNNPSRAWKQERYGQDWLIGDTINASIGQGFTLASPIQLATMTARLASGTAVLPRLVR
PRTGQDQDTAAPAPLGLSADALAIVRQGMFEVSNHERGTAYSSRIADPTLAMAGKTGTSQ
VFSITAAERAAGVRSQDELPWNRRDHALFVAFAPFDAPRFAVTVVVEHGGGGSTAAAPIA
RDIMLFAQHGGLPPEDAYPTSQRARIREDLALLSERILPPDGTIATVSRT
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
gtgcgtcgatctgaacgcgatctcgcgcacgcggcaaagaatacgacccggcggtccctc
ctgctgggtggggcgatgtcctcggtggtcggtgttttgggcttccggatgtggcaactg
ggcgtccgcgatgctgaacagtactaccttctggccgaagaaaaccgaatcagcctgcgg
ctggtacgtcccgacaggggtcgcatccttgaccgggccggaaagatcgttgctgacaac
gagcaggcatatcgcatcacgctggtaaaggaagaagcccgagatgtcgacgacgttctg
caaaagctgcgggtgctgctcggcctcgacgcagagactgtttcgaaggtgaacgagcag
atcgaccgtgttcgagctttcgtgccggtaacggtgaaggaccgcgtcacttgggacgaa
ttgtcgatcgtggcactgaactcaccagtccttcccggtgtgcagcccgagatggtcctt
tcccgcgtctatcctttcggcccggatttcgcgcatcaggtcggttatgtagggccggta
agcgacagcgatctggagaacgaagcggctgacaatgcgccgctgctccgcctgcccgat
tttgaagtcggcaagacaggagtggagcgaatccacgaacgcaccttgcgcggcatgccg
ggcacgcgccgcgtcgaggtcaacgtgtccggccgcacgatgcgcgaactcgatctcgat
cctgcaactcctggcccggatatgcaggttacgctcgatcaccatttacaaaacttcatg
cgcgtccggctggaaggccaaagcgctgccgcgatcgtgatggacgtgacaaacggcgat
ttgcttggctgcacctcggcgccctccttcgatccgaaccttttcgtccgcgggatttcc
agccgcgactacggcacgctccgtgacagcgaattccgcccgcttgcagacaagacggtg
cagggggcctatccgccgggatcgacgatcaagatgtcgaatgcgctggccgcgctggaa
accgggctgatggacccggaagagactgtcgcctgcaatggctatgtcgagatctccggc
cgaaggttccactgctggaagcgcggtggtcatggccgagtgaacatggtcggcgcgctg
cgcgagtcttgcgacgtctacttctacgaggtcgcgcagcgcatcggcattgacggcatc
ttcgcgatgaacgaccggctggggcttggccagaagtacgaccttccgctgtccggcatg
gcgcacggcaacaatccatcgcgtgcttggaagcaggaacggtacgggcaggactggctg
atcggggacaccatcaatgcctcgattgggcaaggcttcacgctcgcctcgccgatccag
cttgccaccatgacggcgcgactggcttcggggaccgccgtgttgccccgactggtgcga
ccgcgtaccgggcaggaccaggatacggctgctccggccccgctcggtctgtcggccgat
gcactggccattgtgcgacagggcatgttcgaggtctcgaaccacgagcgcgggacggcc
tattcctcgcggatcgccgatccgacattggcgatggccggcaagacgggaacgagccag
gtcttctcgatcaccgctgccgagcgggcggcaggcgtccgctcgcaggacgagctgccg
tggaaccggcgcgatcacgcgctgttcgtggcctttgcaccctttgatgcgccgcgcttt
gctgtcacggtcgttgtggaacacggcggtggcgggtcaacggcagcggcgccaattgcg
cgcgacatcatgctgtttgcacagcatggcggcctgccgcctgaggacgcctatccgaca
tcgcagagggcgcgcatacgggaggacctagccctgctgtccgaacgcatcctgccgccg
gacggcacgatcgccacagtgagccggacatga
DBGET
integrated database retrieval system
