Nocardioides seonyuensis: EXE58_00470
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Entry
EXE58_00470 CDS
T06627
Name
(GenBank) Ig-like domain repeat protein
KO
K20276
large repetitive protein
Organism
nsn
Nocardioides seonyuensis
Pathway
nsn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
nsn00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EXE58_00470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_3_5
DUF4962
Big_13
Motif
Other DBs
NCBI-ProteinID:
QBX54096
UniProt:
A0A4P7IAT6
LinkDB
All DBs
Position
93986..98407
Genome browser
AA seq
1473 aa
AA seq
DB search
MSRSIQPSKMGVRACVALVIGLVVATLGVAAPSYAAAPEAPSGLNVDQPIPSTTKFNWNR
SEGAERYEIQVDDDPSFSSPEVNTATVNSVYVPEVVLKPSENHWRVRAVLGTERSTWSSG
LPFSPPTVSVPIPSSPTNGAHLQQPGNPPLLSWTPSPGAKSYTVQVDSDSDFVGVDEYTT
ETTSLVVSRPLGLGDWFWRVIASKGPGIVSEPSSASSFWIDPLATPVITGPLGSSPTVSP
DVMDVVLDWDPVPGAVGYELQVASAADFSPGSIVEDRTGSLKRVFGTKFSPPITYDNNGY
YWRVRAVDPAGNSSDWARSQVDFNRHYDEAPELIYPADGATNVPDPLYFDWKAVTHASEY
EIWVGTDEFFSPNTYNSCRVAATTYTPGLFAINDTDLTNVLPNRINEDCDPAPGKVNYWR
VRPLDRPYVKPGGGDLPGVQGLWSPTQSFTYTGLEMNNLLPPHNATVDIPSLSWDVSPGA
LTYRVEIRNGLGNTVDSATTHGTSYTPKGNQRFPAANNPYTWTVYAETAEGTKSLIPQRR
FYVTGEQPTPSGADPLTPRGPAPGSTFTGPPSLTWEPHPDAAFYRVHAHNSENILVPSAA
FGNGAAYPYAAMTDTSSELKRAGTYTWWVTAHSSTGLVIAEGPDSTFQIRNFAAPVGHKV
ALGGRALDSNNPGQTPCTPTTGVCTVPATPVLKWDREPGTAFYMVYVSEDPSFSNLLEPT
TAVPATTNTMYTPALDNRDWTYADNQTERPYYWFVRPCRAVAQCGAGPVGVAGSAQHTFF
KKSPPVTGLESTVTERTEVSFDWDNYWHDPESSDPADKWQQTGEALPQSAMKYRIEIATD
SSFSPSSIVESAEVDQTTFTSTARIYPTRTYWWRVQAIDSDGNGLTWSTQEATFVRSTPA
ITQLSPVGNAQAPSTTAFRWEAQPYAKAYNVEVFRNDDSTFSTANRVAFGTNVLTTAYTW
NKALAPSTTAYRWRVQRVDASGNLGDWSNTGRFFVSAGTPNIVAPASGGLQAPNGPVLEW
EPLAGAASYTVTITPQGVGSNVIANTVSTAWAATAKFASGTYSWSLAAKDASGNTLGTAT
SSFQVDAVLEADQAPAILAPNGTAVGDELQVQAPVWAGHTDVTNTYQWLRDGAPIIGATG
TAYVLQAADYNKMVSVKATGTKPNFAPGSSTSDGVLVGAGTALVATSNPVVSGSVTVGST
LFTTAGTWNQAPNGFRYQWLRNGVPIDQATTSSYRTVAEDIGLPISVRVYATKTGYTDGE
AVSAAIVVVGAPGSGGGGGTETGGTVTPTSLPTISGTPGVGAFLSVKNGTWNPAAGVMFT
YQWLRDGAPIPAATSLMYRVTEQDAAHTLSVVVTGTKAGMANGAATSPGVVVPKVSSTTS
VTAFPTTITKSQRAKLTIRVTAPGLTKPTGKLVIKDGRKTLKTTTLKASHNGVRTYKLPR
LKVGKHKLKVIYKGSSAINSSKSKKLKIIVRKK
NT seq
4422 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgctccattcagccgtcgaagatgggcgtgcgcgcatgcgtagcgctggtcatc
ggactcgtcgtcgcgaccctgggcgtcgccgcaccgtcgtacgccgccgcgcccgaggcg
ccgagcggcctcaacgtggaccagccgatcccctcgaccaccaagttcaactggaaccgc
tccgaaggcgccgagcgctacgagatccaggtggacgacgacccgtccttcagctccccc
gaggtcaacacggccacggtgaactcggtctatgtccccgaggtcgtgctcaagccctcg
gagaaccactggcgggtgcgtgccgtgctcgggacggagaggtcgacgtggtcctccggc
ctgccgttcagtcccccgaccgtcagtgtccccatcccctcgagtccgaccaacggtgcc
cacctgcagcagccggggaaccccccgttgctctcctggaccccctctccgggcgcgaag
tcctacaccgtccaggtcgacagcgacagcgacttcgtcggcgtcgacgagtacaccacg
gagacgacctcgctcgtcgtgtccaggccgctcggcctgggagactggttctggcgggtc
atcgcgtccaagggtccgggcatcgtgtccgagcccagcagcgcctcctccttctggatc
gacccgctcgcgacgccggtcatcaccgggccgctcgggtcctcgcccaccgtctccccc
gacgtgatggacgtggtgctggactgggaccccgtccccggagccgtcggatacgagctc
caggtggccagtgccgccgacttcagccccggctccatcgtggaggaccgcacgggatcg
ctcaagcgcgtcttcggcacgaagttctccccgccgatcacctacgacaacaacggctac
tactggcgtgttcgcgcggtcgacccggccggcaactcctcggactgggcgcggtcgcag
gtcgacttcaaccgtcactacgacgaggcgcctgagctgatctacccggccgacggcgcg
acgaacgtcccggacccgctgtacttcgactggaaggcggtcacgcacgcctccgagtac
gagatctgggtcgggaccgacgagttcttctcgcccaacacctacaactcgtgccgcgtc
gcagcgacgacgtacacccccgggctcttcgccatcaacgacaccgacctgacgaacgtg
ctccccaaccggatcaacgaggactgcgaccccgcgccgggcaaggtcaactactggagg
gtgcggccgctcgaccggccctacgtgaagcccggcggcggagacctgcccggcgtgcag
ggcctctggtcccccacccagagcttcacctacaccggcctcgagatgaacaacctgctc
ccgccccacaatgcgaccgtcgacatcccctccctgagctgggacgtctccccgggtgcg
ctcacctaccgggtcgagatccgtaacggcctgggcaacacggtggacagcgcgaccacg
cacggcacgtcctacaccccgaagggcaaccagcgcttccccgcggcgaacaacccctac
acgtggacggtctacgccgagaccgccgagggcaccaagtccctgatccctcagcgccgg
ttctacgtcaccggtgagcagcccactccgtcgggggccgaccccctcacgccccgcggc
ccggcgcccgggagcaccttcaccggcccgccgtccctcacctgggagccgcaccccgac
gcggccttctaccgggtgcacgcgcacaactccgagaacatcctcgtgccgagcgcggcc
ttcggcaacggcgccgcctacccctacgccgccatgaccgacacctccagcgagctcaag
cgcgccggcacctacacctggtgggtgaccgctcactcgtccaccggcctggtgatcgcg
gagggtccggacagcaccttccagatccgcaacttcgcagcgccggtgggccacaaggtc
gccctgggcggtcgtgccctcgactccaacaacccggggcagacaccgtgcaccccgacg
accggtgtgtgcacggtccccgcgaccccggtgctgaagtgggacagggagccgggaacg
gccttctacatggtctacgtcagcgaggacccgagcttctccaacctgctcgagcccacg
accgcggtcccggccacgaccaacacgatgtacaccccggccctggacaaccgcgactgg
acctacgcggacaaccagaccgagcgcccgtactactggttcgtccgcccctgccgtgcc
gtggcgcagtgcggagcgggcccggtgggtgtggccgggtcggcacagcacaccttcttc
aagaagtcgccgccggtcaccggtctcgagagcaccgtgaccgagcggaccgaggtcagc
ttcgactgggacaactactggcacgaccccgagtcctcggaccctgcggacaagtggcag
cagaccggtgaggcactgccccagtcggcgatgaagtaccggatcgagatcgcgactgac
tcctcgttctccccgtcctcgatcgtcgagtcggccgaggtcgaccagaccaccttcacc
agcactgcgcggatctaccccacgcggacctactggtggcgggtgcaggccatcgactcg
gacggcaacgggctcacctggtcgacgcaggaggccaccttcgttcgctccacgccggcg
atcacgcagctgtccccggtgggcaacgcccaggcgccgagcaccacggccttccggtgg
gaggcccagccctacgccaaggcctacaacgtcgaggtcttcaggaacgacgactccacc
ttctccacggccaaccgcgtcgccttcggcaccaatgtcctcaccaccgcctacacgtgg
aacaaggcgctggcgcccagcaccaccgcctaccgctggcgggtccagagggtcgacgcc
tccgggaacctcggtgactggtcgaacacgggacgcttcttcgtctcggcaggcactccg
aacatcgtcgcaccggcctcgggaggcctccaggctcccaacggtccagtgctcgagtgg
gagccactcgccggtgcggccagctacaccgtcacgatcactccgcagggagtcggatcc
aacgtcatcgcgaacacggtgtccacggcctgggcggccacggcgaagttcgccagcggg
acctacagctggtccctcgcggcgaaggacgccagcggcaacacgttgggcaccgccacg
tcgtccttccaggtcgacgccgtgctcgaggccgaccaggcccctgcgatcctcgcgccg
aacggcacggccgtgggcgacgagctccaggtccaagctcccgtctgggcagggcacacc
gatgtgaccaacacctaccagtggctgcgtgacggggctccgatcatcggcgccactggc
accgcctacgtcctgcaggccgccgactacaacaagatggtgtcggtcaaggccaccggg
accaagcccaacttcgctccgggaagctccaccagcgacggtgtcctggtcggcgcgggc
accgcactcgtggcgacctcgaacccggtcgtctcaggctcggtgactgtcggatcgacc
ttgttcaccacggcggggacctggaaccaggctcccaacggcttccgctaccagtggctg
cgcaacggcgtcccgatcgaccaggcaaccacgtcgagctaccggaccgtggccgaggac
atcggactgccgatcagcgtccgtgtctacgccaccaagaccggctacaccgacggtgag
gcagtgtccgcggcgatcgtcgtcgtgggcgcgcccggctcgggtggcggcggcggtacc
gagaccggcggaacggtcacgccgacgtcgctcccgacgatctccgggacccccggcgtg
ggcgccttcctctcggtgaagaacggcacctggaacccggccgccggcgtgatgttcacg
taccagtggctgcgcgacggtgcacccatccccgctgccacctcgctgatgtaccgcgtc
accgagcaggacgccgcccacaccttgtcggtggtggtcaccgggaccaaggcgggcatg
gccaacggcgccgcgacctcgccgggcgtggtcgtgcccaaggtctcctcgaccacctct
gtgacggccttcccgacgacgatcaccaagagccagcgcgccaagctgaccatcagggtg
accgccccgggcctgaccaagccgaccggcaagctggtgatcaaggacggtcgcaagacc
ctcaagaccaccacgctgaaggcctcgcacaacggggtccgcacctacaagctgccgcgc
ctgaaggtgggcaagcacaagttgaaggtgatctacaagggcagctcggcgatcaactcg
tcgaagtccaagaagctcaagatcatcgtccggaagaagtga
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