Nocardioides seonyuensis: EXE58_01100
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Entry
EXE58_01100 CDS
T06627
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
nsn
Nocardioides seonyuensis
Brite
KEGG Orthology (KO) [BR:
nsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsn03032
]
EXE58_01100
03036 Chromosome and associated proteins [BR:
nsn03036
]
EXE58_01100
03400 DNA repair and recombination proteins [BR:
nsn03400
]
EXE58_01100
DNA replication proteins [BR:
nsn03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EXE58_01100
Chromosome and associated proteins [BR:
nsn03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
EXE58_01100
DNA repair and recombination proteins [BR:
nsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
EXE58_01100
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
Motif
Other DBs
NCBI-ProteinID:
QBX54206
UniProt:
A0A4P7IB28
LinkDB
All DBs
Position
complement(225468..226139)
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AA seq
223 aa
AA seq
DB search
MNKSQLIDALAARYEGNRKQAAHALDSVLDTITREVARGEKVAITGFGSFEKAVRNARWV
RNPQTGERIKSKKKSVPKFSAGKEFKDIISGAKKLQKLTAANMPKPPAQVRAAASAVSAP
ARAAATKKATPAKKATPAKTAAAKKATPAKKTTAKKATPAKKTAPAKTAAAKKTTPAKKT
TAKKATPAKKSTPAKKTTAKKATPAKKTTTAKKAPAKKTAKKS
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtcacagctcatcgacgcgctcgccgcgcgttacgaggggaaccgcaagcag
gcggcccacgcactcgactcggtgctcgacaccatcacccgcgaagtcgcgcggggtgag
aaggtggcgatcaccggcttcggttcgttcgagaaggcggtgcgcaacgcccgctgggtc
cgcaacccgcagaccggcgagcgcatcaagtccaagaagaagtcggtgccgaagttctcc
gcaggcaaggagttcaaggacatcatctccggcgccaagaagctccagaagctgacggca
gccaacatgcccaagcctccggcccaggtgcgcgctgccgcgtccgcggtgtccgccccg
gcccgggctgcggcgacgaagaaggccaccccggccaagaaggccacgccggcaaagacg
gcagctgccaagaaggccacgccggccaagaagaccacggcgaagaaggccaccccggcc
aagaagaccgctcccgccaagaccgcggctgccaagaagacgacgccggccaagaagacc
acggcgaagaaggccaccccggccaagaagtcgacgccggccaagaagaccacggcgaag
aaggccactcccgccaagaagaccaccacggccaagaaggctccggcgaagaagaccgcc
aagaagtcctga
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