Nocardioides seonyuensis: EXE58_04970
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Entry
EXE58_04970 CDS
T06627
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
nsn
Nocardioides seonyuensis
Pathway
nsn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EXE58_04970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsn03400
]
EXE58_04970
DNA repair and recombination proteins [BR:
nsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EXE58_04970
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EXE58_04970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_29
DnaJ_CXXCXGXG
AAA_16
nSTAND1
Anti-TRAP
AAA_33
SMC_N
AAA_22
NB-ARC
AAA_15
Viral_helicase1
DUF4350
cobW
DUF5351
BCA_ABC_TP_C
YmcF-like
Motif
Other DBs
NCBI-ProteinID:
QBX54879
UniProt:
A0A4P7ICP8
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Position
1006603..1009002
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AA seq
799 aa
AA seq
DB search
MTTDPGDPFVRVRGASEHNLRNVDVDIPRDAMVAFTGVSGSGKSSLAFGTLYAEAQRRYF
ESVAPYARRLLQQVGAPHVQEITGLPPAVALQQRRGAATSRSSVGTITTLSNLLRMLYSR
AGDYPPGADHLAAEAFSPNTVAGACPRCHGLGVVHDVTEELLVPDRSLSIRDGAIAAWPG
AWQGANLRSIVTGLGIDIDRPWSRLNKKDRDWLLFTDEQPSVLIKPQRDRIDHGYYGKFW
SARKHVMHTLADSKSERMRERALRYVEDAPCPDCRGSGLRPEAIAVSFAGRSIAEVNQLP
FVDLVEMLRPIAAAPEEMGEVAVRICADLLARVEVLLHLGLGYLSLGRSSTTLSPGEAQR
LRIATQLRSGLFGVVYVLDEPSAGLHPADAQPLLDVLDRLTASGNSLFVVEHDLDVVRRA
DWVVDIGPGAGEAGGRVLYSGPVAGLEDVAESATSAHLFGRAEELAHDVRTPQGWLELTG
VSRHNLRDVSVEIPLCVLTAVTGVSGSGKSTLVSQVLADDPKALESFDRLVLVDQRPIGR
TPRSNLATYTGMFDAVRKLYAATDAARARGYGAGRFSFNVPEGRCETCQGEGFVAVELLF
LPGTYAPCPTCHGARYNAETLEITYRGTNVAELLAMPVDLAATFLADVPAAARSLETLRD
VGLGYLRLGQPATELSGGEAQRIKLATELQRARRGHALYLLDEPTTGLHPSDVALLLRQL
HRLVDAGNTVVLVEHNLDAIATADWVIDLGPGGGDAGGQVIATGTPAEVALVEGSATAPY
LAQRLSKMAPQGLSHPEMT
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atgaccactgacccgggcgaccccttcgttcgcgtccgcggcgccagcgagcacaacctg
cgcaacgtcgacgtcgacatcccccgcgacgccatggtcgcgttcaccggtgtctccggc
tcgggcaagtcctcgctggcgttcggcacgttgtacgccgaggcacagcgccgctacttc
gagtccgtggcgccctacgcacgacgactgctgcagcaggtcggtgcgccgcacgtccag
gagatcaccgggctcccacctgccgtggccctccagcagcgtcgcggagcggcgacgtcc
cgatcgtcggtgggaaccatcaccacgctctccaacctcctgcggatgctctactcccgg
gcgggcgactacccgccgggtgcggaccacctcgcagctgaggcgttctcccccaacact
gtcgctggcgcctgcccacgctgccacggcctgggtgtcgtgcacgacgtcaccgaggag
ctgctcgtcccggaccggtcgctgagcatccgcgacggggccatcgccgcatggcccggg
gcctggcagggcgccaacctgcgcagcatcgtcaccggtctgggcatcgacatcgaccgg
ccgtggagcaggctgaacaagaaggaccgcgactggctgctcttcaccgacgagcagccc
tccgtcctgatcaagccccagcgcgaccggatcgaccacggctactacggcaagttctgg
agcgcgcgcaagcacgtcatgcacacgctcgccgactccaagagcgagcggatgcgcgag
cgtgcccttcggtacgtcgaggacgcgccctgccccgactgccgcggcagtgggctgcgt
cccgaggccatcgcggtcagcttcgccggccgatccatagccgaggtcaaccagctcccc
ttcgtcgacctcgtcgagatgctccggcccatcgcggccgccccggaggagatgggggag
gtcgcggtccggatctgtgccgacctgctggcccgggtggaggtgctcctgcacctgggg
ctgggctacctcagcctcggacgcagctcgacgacgctctcgccgggcgaggcgcaacgt
ctgcggatcgccacccagctgcgctccgggctgttcggggtcgtctacgtcctggacgag
ccgtccgctggcctgcaccccgcggatgcccagccactcctcgacgttctcgatcggctg
acggcgtccggcaactcgctcttcgtcgtggagcacgacctcgacgtcgtacgccgcgcc
gactgggtcgtcgacatcggcccgggtgcgggcgaggccgggggccgggtgctctacagc
ggtcctgtcgcggggctcgaggacgtcgccgagtccgcgaccagcgcgcatctcttcgga
cgcgccgaggagctggctcacgacgtccgcaccccgcagggctggctggagctgaccgga
gtgtcccgccacaacctgcgcgacgtgtccgtcgagatccccctctgtgtcctgaccgcc
gtcacgggggtgtcaggctccggcaagtccaccctggtcagccaggtgctcgccgacgac
ccgaaagccctcgagtcgttcgatcggctggtgctcgtcgaccagcgtccgatcggccgc
acgccgcggtcgaacctcgcgacctacaccgggatgttcgacgcggtgcgcaagctgtac
gccgccaccgacgcggcccgggcccgtggctacggcgctgggcgcttctccttcaacgtg
cccgagggacgctgcgagacctgccagggcgagggcttcgtcgcggtcgagctgctcttc
ctgcccggcacctacgccccgtgcccgacgtgccacggcgcccgctacaacgccgagacc
ctcgagatcacctaccgcggcacgaacgtcgcagagctgctggccatgccggttgacctg
gccgcgacgttccttgccgacgtgccggccgcggcgcgcagcctcgagacgctgcgcgac
gtgggactgggctacctgcgactgggccagcccgcgaccgagctcagcggtggagaggct
cagcgcatcaagctcgccaccgagctccagcgggcacgccgcggccacgcgctctacctc
ctcgacgagccgaccacggggctgcacccctccgacgtcgcgctgctgctgcgccagctg
caccggctcgtcgacgccggcaacacggtggtgctcgtcgagcacaacctcgacgccatc
gccaccgccgactgggtcatcgacctcgggccaggaggaggggacgcgggcgggcaggtg
atcgccaccgggacaccggccgaggtcgcgctggtcgaaggcagcgcgacggcgccgtac
ctcgcacaacggctcagcaagatggctccgcaaggactgagccaccccgaaatgacctga
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