KEGG   Nocardioides seonyuensis: EXE58_04970
Entry
EXE58_04970       CDS       T06627                                 
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
nsn  Nocardioides seonyuensis
Pathway
nsn03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:nsn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    EXE58_04970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:nsn03400]
    EXE58_04970
DNA repair and recombination proteins [BR:nsn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EXE58_04970
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      EXE58_04970
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind AAA_21 AAA_29 DnaJ_CXXCXGXG AAA_16 nSTAND1 Anti-TRAP AAA_33 SMC_N AAA_22 NB-ARC AAA_15 Viral_helicase1 DUF4350 cobW DUF5351 BCA_ABC_TP_C YmcF-like
Other DBs
NCBI-ProteinID: QBX54879
UniProt: A0A4P7ICP8
LinkDB
Position
1006603..1009002
AA seq 799 aa
MTTDPGDPFVRVRGASEHNLRNVDVDIPRDAMVAFTGVSGSGKSSLAFGTLYAEAQRRYF
ESVAPYARRLLQQVGAPHVQEITGLPPAVALQQRRGAATSRSSVGTITTLSNLLRMLYSR
AGDYPPGADHLAAEAFSPNTVAGACPRCHGLGVVHDVTEELLVPDRSLSIRDGAIAAWPG
AWQGANLRSIVTGLGIDIDRPWSRLNKKDRDWLLFTDEQPSVLIKPQRDRIDHGYYGKFW
SARKHVMHTLADSKSERMRERALRYVEDAPCPDCRGSGLRPEAIAVSFAGRSIAEVNQLP
FVDLVEMLRPIAAAPEEMGEVAVRICADLLARVEVLLHLGLGYLSLGRSSTTLSPGEAQR
LRIATQLRSGLFGVVYVLDEPSAGLHPADAQPLLDVLDRLTASGNSLFVVEHDLDVVRRA
DWVVDIGPGAGEAGGRVLYSGPVAGLEDVAESATSAHLFGRAEELAHDVRTPQGWLELTG
VSRHNLRDVSVEIPLCVLTAVTGVSGSGKSTLVSQVLADDPKALESFDRLVLVDQRPIGR
TPRSNLATYTGMFDAVRKLYAATDAARARGYGAGRFSFNVPEGRCETCQGEGFVAVELLF
LPGTYAPCPTCHGARYNAETLEITYRGTNVAELLAMPVDLAATFLADVPAAARSLETLRD
VGLGYLRLGQPATELSGGEAQRIKLATELQRARRGHALYLLDEPTTGLHPSDVALLLRQL
HRLVDAGNTVVLVEHNLDAIATADWVIDLGPGGGDAGGQVIATGTPAEVALVEGSATAPY
LAQRLSKMAPQGLSHPEMT
NT seq 2400 nt   +upstreamnt  +downstreamnt
atgaccactgacccgggcgaccccttcgttcgcgtccgcggcgccagcgagcacaacctg
cgcaacgtcgacgtcgacatcccccgcgacgccatggtcgcgttcaccggtgtctccggc
tcgggcaagtcctcgctggcgttcggcacgttgtacgccgaggcacagcgccgctacttc
gagtccgtggcgccctacgcacgacgactgctgcagcaggtcggtgcgccgcacgtccag
gagatcaccgggctcccacctgccgtggccctccagcagcgtcgcggagcggcgacgtcc
cgatcgtcggtgggaaccatcaccacgctctccaacctcctgcggatgctctactcccgg
gcgggcgactacccgccgggtgcggaccacctcgcagctgaggcgttctcccccaacact
gtcgctggcgcctgcccacgctgccacggcctgggtgtcgtgcacgacgtcaccgaggag
ctgctcgtcccggaccggtcgctgagcatccgcgacggggccatcgccgcatggcccggg
gcctggcagggcgccaacctgcgcagcatcgtcaccggtctgggcatcgacatcgaccgg
ccgtggagcaggctgaacaagaaggaccgcgactggctgctcttcaccgacgagcagccc
tccgtcctgatcaagccccagcgcgaccggatcgaccacggctactacggcaagttctgg
agcgcgcgcaagcacgtcatgcacacgctcgccgactccaagagcgagcggatgcgcgag
cgtgcccttcggtacgtcgaggacgcgccctgccccgactgccgcggcagtgggctgcgt
cccgaggccatcgcggtcagcttcgccggccgatccatagccgaggtcaaccagctcccc
ttcgtcgacctcgtcgagatgctccggcccatcgcggccgccccggaggagatgggggag
gtcgcggtccggatctgtgccgacctgctggcccgggtggaggtgctcctgcacctgggg
ctgggctacctcagcctcggacgcagctcgacgacgctctcgccgggcgaggcgcaacgt
ctgcggatcgccacccagctgcgctccgggctgttcggggtcgtctacgtcctggacgag
ccgtccgctggcctgcaccccgcggatgcccagccactcctcgacgttctcgatcggctg
acggcgtccggcaactcgctcttcgtcgtggagcacgacctcgacgtcgtacgccgcgcc
gactgggtcgtcgacatcggcccgggtgcgggcgaggccgggggccgggtgctctacagc
ggtcctgtcgcggggctcgaggacgtcgccgagtccgcgaccagcgcgcatctcttcgga
cgcgccgaggagctggctcacgacgtccgcaccccgcagggctggctggagctgaccgga
gtgtcccgccacaacctgcgcgacgtgtccgtcgagatccccctctgtgtcctgaccgcc
gtcacgggggtgtcaggctccggcaagtccaccctggtcagccaggtgctcgccgacgac
ccgaaagccctcgagtcgttcgatcggctggtgctcgtcgaccagcgtccgatcggccgc
acgccgcggtcgaacctcgcgacctacaccgggatgttcgacgcggtgcgcaagctgtac
gccgccaccgacgcggcccgggcccgtggctacggcgctgggcgcttctccttcaacgtg
cccgagggacgctgcgagacctgccagggcgagggcttcgtcgcggtcgagctgctcttc
ctgcccggcacctacgccccgtgcccgacgtgccacggcgcccgctacaacgccgagacc
ctcgagatcacctaccgcggcacgaacgtcgcagagctgctggccatgccggttgacctg
gccgcgacgttccttgccgacgtgccggccgcggcgcgcagcctcgagacgctgcgcgac
gtgggactgggctacctgcgactgggccagcccgcgaccgagctcagcggtggagaggct
cagcgcatcaagctcgccaccgagctccagcgggcacgccgcggccacgcgctctacctc
ctcgacgagccgaccacggggctgcacccctccgacgtcgcgctgctgctgcgccagctg
caccggctcgtcgacgccggcaacacggtggtgctcgtcgagcacaacctcgacgccatc
gccaccgccgactgggtcatcgacctcgggccaggaggaggggacgcgggcgggcaggtg
atcgccaccgggacaccggccgaggtcgcgctggtcgaaggcagcgcgacggcgccgtac
ctcgcacaacggctcagcaagatggctccgcaaggactgagccaccccgaaatgacctga

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