Nocardioides seonyuensis: EXE58_05570
Help
Entry
EXE58_05570 CDS
T06627
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
nsn
Nocardioides seonyuensis
Pathway
nsn00550
Peptidoglycan biosynthesis
nsn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nsn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EXE58_05570 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
nsn01002
]
EXE58_05570 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nsn01011
]
EXE58_05570 (dacB)
Enzymes [BR:
nsn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EXE58_05570 (dacB)
Peptidases and inhibitors [BR:
nsn01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
EXE58_05570 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
nsn01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
EXE58_05570 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QBX54975
UniProt:
A0A4P7ICW7
LinkDB
All DBs
Position
complement(1126375..1127871)
Genome browser
AA seq
498 aa
AA seq
DB search
MAREREARRDLDVRGDVRHYTGPGRVAHWLPVLLVLALLGGSVAAYRYDLGPRYLPWLSA
DPETEPAAVAPPPGLDLPEWTAPVIAPALPTTGRIDPVAVAAALGPLLDDPDLGKHVVAA
VGDLTFGSEWTSVEKPDTYLPASTTKLLTVAAALEHLGPEARFTTRVVSGTSPREVVLVG
GGDPYLASKPLTPDGAATAFPPRVDVVTLAREAAEALGGSGRVRVSYDDGLFTGPTASAG
WRSDYVPDDIVSPITALMVDGGREADGYARADDPSLQAARAFADGLAQAGMKVRGKVARV
VVPPDAAELAAVESARLGDIAERVLDVSDNEGAEVLGHHVGLATSGTGSFAAGAAGVGTT
LQGWGIDTSGLRLYDGSGLSRQNRVSAATVLAVLRRVAGSEGGPLRSAVTGLPVAAFTGS
LTYRFDEGPKAARGVVRAKTGTLTGVHALAGLATGRDGVVMAFVVAADKVAEADGLDAQE
AIDQAAAALAACRCAASG
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgagcgcgaagcgaggagggatctggacgtgcgaggtgacgtacgccactac
accggtcctggtcgcgtggcgcactggttgccggtgctgctcgtgctcgcactcctgggc
ggctcggtcgccgcctaccgctacgacctcggtccgcgctacctgccgtggctctccgcc
gaccccgagaccgagcccgctgccgtcgcgccgccgcccggcctggacctgcccgagtgg
accgcacccgtgatcgccccagccctccccacgaccgggcgcatcgacccggtggcggtc
gcggccgcgctggggcccctgctcgacgaccccgacctcgggaagcacgtcgtggccgcc
gtgggcgacctgaccttcggcagcgagtggacgtcggtcgagaagcccgacacctatctg
ccggcctcgaccaccaagctgctcaccgtggccgcggcgctcgagcacctcggccccgag
gcgcgcttcaccacgcgcgtggtgagcggcacctcgccgcgcgaggtcgtgctcgtgggt
gggggcgacccctacctggccagcaagcccctcaccccggacggagcggccacggccttc
ccgccccgcgtcgacgtcgtcactctggcgcgcgaggccgccgaggccctcggcggcagc
ggccgggtgcgggtgagctacgacgacggcctcttcaccggcccgaccgcgagtgccggg
tggcgctccgactacgtccccgacgacatcgtcagcccgatcacggccctgatggtcgac
gggggtcgcgaggccgacggctacgcacgcgccgacgacccgtccctgcaggcggcccgc
gcgttcgccgacggtctcgcccaggccggcatgaaggttcgcggcaaggtggcgcgcgtc
gtcgtaccccccgacgccgccgagctcgccgcggtggagagcgccaggctcggtgacatc
gccgagcgcgtcctcgacgtcagcgacaacgagggtgccgaggtcctcggtcaccacgtc
gggctcgccacctcgggcaccggctcgttcgcggccggtgcggccggggtcgggaccacc
ctgcagggctggggcatcgacacgtccgggctgcggctgtacgacggctccgggctgtcg
cgccagaaccgcgtgtccgccgcgaccgtcctcgccgtgctccgccgggtggccggcagc
gagggtgggccgctccgcagcgctgtgaccggcctaccggtcgcggccttcaccggctcg
ctgacctaccggttcgacgaggggccgaaggccgcgcggggcgtggtgcgcgccaagacc
ggcaccctcaccggcgtgcacgcgctcgccgggctggccaccgggcgcgacggggtggtg
atggccttcgtggtcgcggccgacaaggtcgccgaggccgacggcctcgacgcccaggag
gcgatcgaccaggccgctgccgcgctcgccgcctgccgctgcgccgcctccggatag
DBGET
integrated database retrieval system
