Nocardioides seonyuensis: EXE58_06990
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Entry
EXE58_06990 CDS
T06627
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
nsn
Nocardioides seonyuensis
Pathway
nsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EXE58_06990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsn03400
]
EXE58_06990
Enzymes [BR:
nsn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EXE58_06990
DNA repair and recombination proteins [BR:
nsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EXE58_06990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
AAA_30
UvrD_C_2
AAA_22
PDDEXK_1
ResIII
Motif
Other DBs
NCBI-ProteinID:
QBX55221
UniProt:
A0A4P7IHG3
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All DBs
Position
1418202..1421579
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AA seq
1125 aa
AA seq
DB search
MDVFDITAPLPQGPTTTLLEASAGTGKTWTIAALVTRYVAEGVARLDELLVVTFTRAASQ
ELRERVRAQLTTARDALAGDSQSPPADAMVEWLLDADESERARRLARLTAALTDFDAATI
ATIHQFCQLVLRSLGVAGDTDTDARLVEDLEQLTHEVVDDLFLASFADLPAPPWSHDVAL
QIGRAVVDDPRAAIEPRAALTEAPDSTAAARVRFGTEVLAEVERRKRRLGVLSYDDLLSQ
LADALDDPRSDARARMRRRWKVALIDEFQDTDPVQWQVFERAFHAHSTLVLIGDPKQAIY
AFRGGDVVTYLRAAEVATTRQTLGVNWRADGPVLASLQALMRDARLGSDEIVVLPVAADR
DSSRLEGAGPPFRLRVVRRAELGLGLGPKAKPPRVDVWRRHVTTDLAQDIKRLLLSGAKF
CGRDLEPSDVAVLAARRSDLTAAQEALAAVGVRSVINAGGSVFHTPAATEWLVLLEALEQ
PHRTARVRAAALTSFVGLDAAALDAGGPDLTNSLTERLRALSDILATRGVAAVLEATVID
GLTDRVLSRLGGERTLTDLHHIGEALHRVSVDERLGPVGLLAWLRQQVADEKKEVAGERT
RRLDSDADAVQLVTIHGSKGLQYPVVYAPTLWDRWTGRDPDVLLFHDDQGRRCRDIGGPS
PARKEHLQRHWTEDAGESLRLLYVALTRAQSQVVAWYAPTNNTAGSPLHRMLFGRLPGGA
AVPDSAPLPDDDKIVTVLGHWKHAGGPQPELATLVAPDVRPLEPSQDALSVRVFDREIDT
AWRRTSYSSLSAAAGTSAIGDATTLSEPEEVPGLEVEEPLPTPEESADETGADLAAVPSP
MAGLPVGATFGSLVHAVLEHADVTATDLRAELVTRIQEQVEWWAVPGLDVEELADALVAV
CDSPLGPLAGGATLRDVTRADRLEELDFELPLAGGDDADATPGSAVLGDVAVLLRRHLPE
GDPVRSYADTLDADPVLAAQVLRGYLTGSIDVVMRREVDGATRFLTVDYKTNWLGEVGAP
LTAHDYRPAVLDEAMGHSDYPLQALLYTVVLHRFLRWRLADYDPEAHLGGVLYLYLRGMC
GPETPLVDGSPCGVFSWRPPVALVTELSDLLDGRLQGRLAGAVRA
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcttcgacatcaccgccccgctcccccagggtccgaccacgaccctgctcgag
gccagcgccggcaccggcaagacctggaccatcgccgcactggtgacgcgctacgtcgcc
gagggcgtggcccggctcgacgagctgctggtcgtcaccttcaccagggcggccagccag
gagctgcgcgagcgcgtccgcgcccagctcacgacggcccgcgacgccctcgccggcgac
tcgcagtcaccccccgccgatgcgatggtcgagtggctcctcgacgccgacgagagcgag
cgggcgcggcggctcgcacgcctgaccgccgcgctcaccgacttcgacgcggcgacgatc
gccaccatccaccagttctgccagctggtcctgcgcagcctcggggtcgccggtgacacc
gacaccgacgctcgtctcgtcgaggacctcgagcagctgacccacgaggtcgtcgacgac
ctcttcctggcaagcttcgccgacctgcccgcgcccccgtggtcccacgacgtcgccctc
cagatcggtcgggccgtcgtcgacgacccccgcgccgccatcgagccccgtgcggctctc
acggaggcccccgactcgaccgccgccgccagggtccggttcggcaccgaggtcctcgcc
gaggtcgagcgccgcaagcgccgtctgggtgtcctcagctacgacgacctgctcagccag
ctggccgacgccctcgacgacccccgctccgacgcgcgcgcccgcatgcgccgacggtgg
aaggtcgccctgatcgacgagttccaggacaccgaccccgtccagtggcaggtgttcgag
cgtgccttccacgcccactcgaccctggtgctcatcggcgaccccaagcaggcgatctac
gcgttccggggcggcgacgtcgtcacctacctcagggcggcggaggtcgcgaccacccgg
cagaccctcggcgtcaactggcgggccgacggcccggtcctcgcctcgctgcaggcactc
atgcgggacgcgcgcctcggcagcgacgagatcgtcgtgctgcccgtcgcggcagaccgc
gacagctcgcgcctcgagggtgccggtccaccgttccggctgcgcgtcgtacgccgtgcc
gagctcggcctcggtctcgggcccaaggcaaagccgccgcgcgtcgacgtgtggcgccgc
cacgtcaccaccgacctggcccaggacatcaagcggctgctcctgagtggcgcgaagttc
tgcggtcgcgacctcgagcccagcgacgtcgccgtgctggcggcgcgacgcagtgacctg
accgcagcccaggaggcgctcgcggcggtcggggtgcgctcggtcatcaacgccgggggg
tctgtcttccacaccccggcagccaccgagtggctcgtgctgctcgaggcgctcgagcag
cctcaccgcacggcgcgggtgcgggcagccgcgctgacctcgttcgtcggcctggatgcc
gccgccctggacgccggcggccccgacctcaccaactccctcaccgagcggctccgggcc
ctgtccgacatcctcgccacccgcggggtcgccgcggtgctggaggcgacggtcatcgac
gggctgaccgaccgggtgctgtcgcggctcggcggtgagcgcacgctgaccgacctccac
cacatcggggaggcgctccaccgggtgtcggtcgacgagcggctggggcccgtcggcctg
ctggcatggctgcggcagcaggtcgccgacgagaagaaggaggtggccggggagcgcacc
cggcggctcgactccgacgcggacgccgtccagctggtgaccatccacggcagcaagggc
ctccagtaccccgtggtctacgcgcccacgctgtgggaccgctggaccgggcgcgacccc
gacgtgctgctcttccacgacgaccagggtcgtcgttgccgcgacatcggcggcccgagc
ccggcgcgaaaggagcacctccagcgccactggaccgaggacgccggcgagtccctccga
ctgctctacgtcgctctcacccgcgcccagtcgcaggtcgtcgcctggtacgcccccacc
aacaacacggccggctcccctctccaccggatgctgttcggtcgcctccccggaggtgcg
gcggtgcccgactcggccccgctccccgacgacgacaagatcgtcactgtcctgggccac
tggaagcacgccggcggcccgcagccggagctcgcgacgctcgtcgcccccgacgtgcgg
ccgctcgaaccgtcgcaggacgccctctcggtgcgcgtcttcgaccgggagatcgacacc
gcgtggcggcgcacgtcctactcctcgctgtcggcagccgcaggcacctcggcgatcggt
gacgcaaccacgctgtcggagccggaggaggttccggggctggaggtcgaggagcccctg
cccacccccgaggagagcgccgacgagaccggcgcagacctggccgccgtcccctcgccc
atggccgggctgcccgtcggcgcgaccttcgggtccctggtccacgcggtcctcgagcac
gccgacgtgacagcgaccgacctccgcgccgagctcgtcacgaggatccaggagcaggtc
gagtggtgggcggtgcccggcctcgacgtcgaggagctcgccgacgcgctcgtcgcggtc
tgcgacagtccgctcggaccactggcaggaggcgcgaccctgcgtgacgtcacgcgggcc
gaccgcctggaggagctcgacttcgagctcccgctcgccggtggcgacgacgcggatgcg
acgcccggctcggccgtgctgggcgatgtcgcggtcctgctccggcgccacctgcccgag
ggcgacccggtgcgctcctacgccgacaccctcgacgccgacccggtgctggctgcgcag
gtgctgcggggctacctcaccggctccatcgacgtcgtcatgcgacgtgaggtcgacgga
gccacccgtttcctcaccgtcgactacaagaccaactggctgggtgaggtcggggcgccg
ctcaccgcccacgactaccgcccggccgtgctcgacgaggcgatgggccacagcgactac
ccgttgcaggcactcctctacaccgtcgtgctgcaccggttcctgcgctggcgcctggcc
gactacgaccccgaggcccatctcggcggcgtcctctacctctacctccgcggcatgtgc
ggtcccgagacacctctggtcgacgggtcgccctgcggcgtcttctcgtggcgtccgcca
gtcgcgctggtcaccgagctctcggacctgctggacggacgcctccagggtcggctggcc
ggggcggtgagggcatga
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