Nocardioides seonyuensis: EXE58_07705
Help
Entry
EXE58_07705 CDS
T06627
Name
(GenBank) DEAD/DEAH box helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
nsn
Nocardioides seonyuensis
Pathway
nsn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nsn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EXE58_07705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nsn03019
]
EXE58_07705
03400 DNA repair and recombination proteins [BR:
nsn03400
]
EXE58_07705
Enzymes [BR:
nsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EXE58_07705
Messenger RNA biogenesis [BR:
nsn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EXE58_07705
DNA repair and recombination proteins [BR:
nsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EXE58_07705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
Pribosyltran
Cas3-like_C_2
HEM4
Motif
Other DBs
NCBI-ProteinID:
QBX55350
UniProt:
A0A4P7IF08
LinkDB
All DBs
Position
1570156..1572318
Genome browser
AA seq
720 aa
AA seq
DB search
MTPQASDDVRHQARAAAEEHLRALVGRDDAVLREDQWSAIEALAVDRRRALVVQRTGWGK
SAVYFVATLLLRAQGAGPTVIISPLLALMRNQIAAAERAGIRAVTINSTNIEAWQPIHDS
IRAGEVDVLLVSPERLNNPGFRDEVLPRLAATAGLLVIDEAHCISDWGHDFRPDYRRIRT
LLGELPEGIPVLATTATANARVTADVAEQLAPPESTSLVEEGPPGPSRDHVLVLRGSLDR
ESLRLGVVQLKTPEQRLAWLADHLTEQPGSGIIYCLTVAATQEVAAYLRERGHEVRAYSG
QTETTERQALEEALVEGRIKALVATSALGMGFDATLGFVINLGAPQSPVAYYQQVGRAGR
GTDEASVVLLPQIEDRDIWAYFASLAFPGEEQVRTTLDVLAGAGRPLSTPALETSVDLSR
NRLETMLKVLDVDGAVRRVQGGWVATGEPWTYDAERYARVAQAREREQQAMLDYLRTTEC
RMRYLRHQLDDPTSADCGRCDNCGGLSLSTSVSEAAVAQAGERLARPGVAIEPRKMWPTA
LSGLGLSLSGKIKEGAEEGRAIARLTDLGHGQALRELFRESTVDGPVPPRLAQALLTVMK
DWSTTWSARPDVIVAVESARRPALTRDLADGLARVMQIPVAGSWALVDPDVPPGAGQANS
AQRVAAVSRRFALQAEVPAAASVLLVDDLVVSGWTLTLAARALREAGAGAVLPLALGTQT
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaccccacaggcgagcgacgacgtacgacaccaggcgcgtgccgctgccgaggagcac
ctgcgggcgctggtcggccgcgacgacgcggtcctgcgcgaggaccagtggtcagccatc
gaggcgctggcagtcgaccggcgccgggcgctggtggtccagcgcaccgggtggggcaag
tcggccgtctacttcgtggcgaccctgctgctgcgagcccagggagccgggccgacggtg
atcatctcgcccctgctggcgctgatgcgcaaccagatcgccgccgccgagcgcgccggc
atccgagccgtcacgatcaactccaccaacatcgaggcgtggcagcccatccacgactcg
atccgagccggcgaggtcgacgtgctgctcgtgagtcccgagcggctcaacaacccgggc
ttccgggacgaggtgctgcctcggctggccgccaccgccgggctcctcgtcatcgacgag
gcccactgcatctccgactggggtcacgacttccgccccgactaccgccgcatccgcacc
ctgctcggcgagctgcccgagggcatccccgtgctcgccaccaccgccaccgccaatgcc
cgggtgaccgccgacgtggccgagcagctcgctccgcccgagtcgacttcgctggtcgag
gagggccccccgggcccgtcacgagaccacgtcctcgtgctgcgcggctcgctcgaccgt
gagtcgctgcggctcggcgtcgtgcagctcaagacccccgagcagcgcctggcctggctc
gccgaccacctcaccgaacagccgggctccggcatcatctactgcctcaccgtcgcggcg
acccaggaggtcgccgcctacctccgcgagcgcggtcacgaggtccgggcctactccggc
cagaccgagaccaccgagcgacaggccctcgaggaggccctggtcgagggacggatcaag
gcgctggtcgccaccagcgcgctggggatgggattcgacgccaccttgggcttcgtcatc
aacctgggtgcgccccagtcgccggtggcctactaccagcaggtcggccgggccgggcgt
ggcaccgacgaggcgagcgtggtgctcctgccccagatcgaggaccgcgacatctgggcc
tacttcgcctccctcgccttccccggcgaggagcaggtgcgcacgacgctcgacgtgctg
gccggcgccggccgcccgctgtcgactcctgccctcgagaccagcgtcgacctcagccgc
aaccgcctcgagacgatgctcaaggtgctcgacgtcgacggggccgtgcgccgcgtccag
ggcggctgggtcgcgacgggcgagccctggacctacgacgccgagcgctacgccagggtc
gcccaggcccgggagcgcgagcagcaggcgatgctcgactacctccgcaccaccgagtgc
cggatgcgctacctccgccaccagctcgacgacccgacgagtgccgactgcgggcggtgc
gacaactgtggcgggctgtcgctgtccacgtcggtgtcagaggctgccgtcgcccaggct
ggtgagcgactggcacggcccggcgtggcgatcgagccgcgcaagatgtggcccacggcc
ctctccggcctcggcctgtccctgagcggcaagatcaaggaaggtgccgaggaaggtcgc
gccatcgcccggctgaccgacctcggccacggccaggcgttgcgcgagctcttccgcgag
tccaccgtcgacggcccggtgccgccgcggctggcccaggccttgctgacggtgatgaag
gactggtcgaccacgtggtcggcccgtcctgacgtcatcgtcgcggtcgagtcggctcgc
cggcccgccctgacacgagacctggccgacgggctggcccgggtcatgcagatccccgtg
gccgggtcgtgggccctcgtcgaccccgacgtcccgcccggcgccggtcaggccaactcc
gcccagcgggtcgccgccgtcagccgtcgcttcgcgctgcaggcggaggtcccagccgcg
gcgagcgtgctgctggtcgacgacctcgtcgtctcggggtggacgctcaccctcgcggcc
cgcgcgcttcgcgaggcaggcgcgggcgccgtgctgccgctcgcactcggcacccagacc
tga
DBGET
integrated database retrieval system
