Nocardioides seonyuensis: EXE58_07795
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Entry
EXE58_07795 CDS
T06627
Name
(GenBank) Fpg/Nei family DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
nsn
Nocardioides seonyuensis
Pathway
nsn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EXE58_07795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsn03400
]
EXE58_07795
Enzymes [BR:
nsn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EXE58_07795
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EXE58_07795
DNA repair and recombination proteins [BR:
nsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EXE58_07795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
DUF294_C
Ribosomal_S13
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
QBX55365
UniProt:
A0A4P7IDU0
LinkDB
All DBs
Position
complement(1592527..1593408)
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AA seq
293 aa
AA seq
DB search
MPELPEVQALAADLKQRLVDRAITRIDLAAFSALKTFDPPLHSLHGTLVEDVTRHGKFLD
ITASGTHFIVHLARAGWIRWRDEVPALPARPNSKNPLAARVVIDDPETDRQAGLDITEAG
TKKSLAIYVVRDPREVEGIARLGPDPLADEFTIDALKAILEAEGRKQIKGVLRHQGTIAG
IGNAYSDEILHAARMSPFKPASSLEEADVQTLYDAIRDTLGDAVARSSGLAASELKGEKK
SHLAVHGRTGQACPVCGDVVREVSFADSSLQYCPTCQTGGKPLADRRMSRLLK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagcttcccgaggtccaggccctcgccgcggacctcaagcagcgcctggtcgac
cgcgcgatcacgcggatcgacctggcggcgttcagcgccctgaagaccttcgaccccccg
ctgcactcgctgcacgggaccctggtcgaggacgtcacgcgacacggcaagttcctcgac
atcaccgccagcggcacccacttcatcgtccacctcgcccgcgccgggtggatccggtgg
cgcgacgaggtgccggccctccctgcacggcccaacagcaagaacccgctcgcggcgcgc
gtcgtgatcgacgaccccgagacagacaggcaggccggcctcgacatcaccgaggccggg
accaagaagagcctggcgatctacgtcgtccgcgacccccgcgaggtggaggggatcgcc
cgcctgggccccgatcccctcgccgacgagttcaccatcgacgccctgaaagccatcctc
gaggccgagggccgcaagcagatcaagggcgtcctgcgccaccagggcaccatcgccggg
atcggcaacgcctactccgacgagatcctccacgccgctcgcatgtcgccgttcaagccg
gccagcagcctggaggaggccgacgtgcagacgctgtacgacgccatccgcgacaccctc
ggcgacgcggtggcccgctcctccgggctcgccgccagtgagctgaagggggagaagaag
agccacctcgcggtgcacggccgcaccggtcaggcctgcccggtctgcggcgacgtcgtg
cgcgaggtgtccttcgccgactcgagcctgcagtactgcccgacctgccagaccgggggc
aagccgctggccgaccggcggatgtcgcgcctgctgaagtag
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