Nocardioides seonyuensis: EXE58_07990
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Entry
EXE58_07990 CDS
T06627
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nsn
Nocardioides seonyuensis
Brite
KEGG Orthology (KO) [BR:
nsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsn03032
]
EXE58_07990 (gyrB)
03400 DNA repair and recombination proteins [BR:
nsn03400
]
EXE58_07990 (gyrB)
Enzymes [BR:
nsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EXE58_07990 (gyrB)
DNA replication proteins [BR:
nsn03032
]
Prokaryotic type
DNA Topoisomerases
EXE58_07990 (gyrB)
DNA repair and recombination proteins [BR:
nsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EXE58_07990 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QBX55398
UniProt:
A0A4P7IE54
LinkDB
All DBs
Position
complement(1626871..1628946)
Genome browser
AA seq
691 aa
AA seq
DB search
MRVSDENPVEKPNGVEYDASAIQVLEGLEAVRKRPGMYIGSTGERGLHHLIWEIVDNSVD
EAMAGYCDRIVLTLQADGSIKVEDNGRGIPTGTAPGQELPALTLALTVLHAGGKFGGGGY
KVSGGLHGVGVSVVNALSTRLVAEVRNRDHLWRQTFTLGVPDGELEQVRPLEAGERTGTS
ITWWASQDIFETVDYNLETITNRIREMAFLNKGLQIVVRDEREHAAEIAEAVEDPTIDPQ
LDQASSDAIQRTETGLERVFKYDRGLVDYVEHLNRRKDKANPTVISFEAETPPGAPSLMS
LEVAMQWNTSYTESVHTFANNINTPEGGTHEEGFRAALTSLVNHWGEEWGLIKKKEDRVS
GDDIREGLTAIISIKLGEPQFEGQTKSKLGNTEAKGFTQRVVNDQLGAFFEENPAEGKDI
VRKSQAAASARIAARKARELARGRKGLLGGGSLPGKLSDCQSTNPEECEVFIVEGDSAGG
SARQGRDPRIQAILPIRGKILNVEKARIDKVLANAEVQAIISALGTGIHEEFNLEKLRYH
KIVMMADADVDGHHINTLLLTLLFRFMKPLIEHGFVYMAQPPLYRLRWNKPHEHEFVYSD
AERDALMKDGLAQGKKLPKENPVQRYKGLGEMNADELWETTMDPSQRLMLQVGLEDAAQA
DEIFSILMGEDVEQRRSFIQRNAKDVRFLDI
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtgagcgacgagaaccctgtcgagaagcccaacggcgtggagtacgacgcctcc
gcgatccaggtcctcgaaggactcgaagcggtccgcaagcgcccgggcatgtacatcggg
tccaccggcgagcgggggctgcaccacctcatctgggagatcgtcgacaactccgtcgac
gaggcgatggcgggctactgcgaccgcatcgtcctgaccctgcaggccgacggctcgatc
aaggtcgaggacaacgggcgaggcatccccaccgggacggcgcccgggcaggagctgccg
gcgctgacgctcgccctcacggtgctgcacgccggaggcaagttcggcgggggcggctac
aaggtctccggtggtctccacggtgtgggtgtctcggtggtcaacgcgctgtccacgcga
ctggtcgccgaggtccgcaaccgcgaccacctgtggcgccagaccttcaccctcggcgtg
cccgacggtgagctggagcaggttcgtccgctcgaggcgggcgagcggaccggcacgtcc
atcacctggtgggcctcgcaggacatcttcgagaccgtcgactacaacctcgagacgatc
accaaccgcatccgcgagatggccttcctcaacaagggcctccagatcgtggtccgcgac
gagcgcgagcacgccgccgagatcgccgaggccgtcgaggaccccacgatcgacccgcag
ctggaccaggcgagctccgacgccatccagcgcaccgagaccggcctcgagcgggtgttc
aagtacgaccgcggcctcgtcgactacgtcgagcacctcaaccggcgcaaggacaaggcc
aacccgacggtcatctccttcgaggccgagaccccgcccggggcccccagcctgatgagc
ctcgaggtcgcgatgcagtggaacaccagctacaccgagtcggtccacaccttcgccaac
aacatcaacacccccgagggcggcacccacgaggagggcttccgtgcggcgctcacctcc
ttggtcaaccactggggcgaggagtggggcctgatcaagaagaaggaggacagggtctcc
ggtgacgacatccgcgagggtctgaccgccatcatctcgatcaagctcggcgagccgcag
ttcgagggccagaccaagtccaagctcggcaacaccgaggccaagggcttcacccagcgg
gtcgtcaacgaccagctcggtgccttcttcgaggagaaccccgccgagggcaaggacatc
gtccgcaagagccaggccgccgcgagtgcgcgcatcgccgcccgcaaggcgcgcgagctc
gcccgcggccgcaagggcctgctcggtggcggcagcctccccggcaagctcagcgactgc
cagtcgaccaatcccgaggagtgcgaggtcttcatcgtcgagggagactcggccggcgga
tccgcgcgacaaggccgcgacccccgcatccaggcgatcctcccgatccggggcaagatc
ctcaacgtcgagaaggcccgcatcgacaaggtgctcgccaacgccgaggtccaggcgatc
atctccgcgctcggcaccggcatccacgaggagttcaacctcgagaagctgcgctaccac
aagatcgtgatgatggccgacgccgacgtcgacggccaccacatcaacaccctcctgctg
accctgctgttccgcttcatgaagccgctgatcgagcacggcttcgtctacatggcgcag
ccgcccctctaccgcctgcgctggaacaagccccacgagcacgagttcgtctactccgac
gccgagcgcgacgccctgatgaaggacggcctggcccagggcaagaaactccccaaggag
aaccccgtccagcgctacaagggtctcggcgagatgaatgccgacgagctgtgggagacc
accatggacccctcccagcgcctgatgctccaggtggggctcgaggacgcggcgcaggcc
gacgagatcttctcgatcctcatgggcgaggacgtcgagcaacgccgctccttcatccag
cgcaacgccaaggacgtccgattcctcgatatctag
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