Nocardioides seonyuensis: EXE58_08100
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Entry
EXE58_08100 CDS
T06627
Symbol
sigM
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
nsn
Nocardioides seonyuensis
Brite
KEGG Orthology (KO) [BR:
nsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsn03021
]
EXE58_08100 (sigM)
Transcription machinery [BR:
nsn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EXE58_08100 (sigM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_28
HTH_23
DUF134
HTH_17
Motif
Other DBs
NCBI-ProteinID:
QBX55419
UniProt:
A0A4P7IDZ1
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All DBs
Position
complement(1647096..1647773)
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AA seq
225 aa
AA seq
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MDTDPMSSEPHPSDVELLRAHVAGDPDAFGELFGRHRDRLWAVALRTMGNPEDAADGLQD
AMIAAFRRAGSFRGDSAVTTWLHRIVVNACLDRHRAAKVRRVEALPEDVEDRGSLVAAAT
PADGPEATALDRERRQRVLDALATLPVEQRAALVLVDMEGHSVAEAAEMLGCASGTVKSR
CSRGRARLAPLLLDLDATPSAPGPGNPPGPGTVQSPRSPRGPPAS
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgaccccatgagcagcgagccgcatcccagcgacgtcgagctcctgagggcc
cacgtcgccggcgaccccgacgccttcggcgagctgttcgggcgccatcgcgaccggctg
tgggccgtggcgctccgcacgatgggcaaccccgaggacgccgccgacggtctccaggac
gccatgatcgccgcattccggcgcgccgggtccttccgcggcgactccgcggtcaccacc
tggctgcaccgcatcgtcgtgaacgcctgcctcgaccggcaccgtgccgccaaggtccga
cgcgtcgaggcactgcccgaggacgtcgaggaccgcggcagtctcgtcgcagcggcgacc
ccggccgacggccccgaggccaccgcactggaccgcgagcgacggcagcgggtcctcgac
gcgctggcgacgctgcccgtcgagcagcgcgcggcgctggtgctcgtcgacatggaggga
cacagcgtcgccgaggccgccgagatgctgggttgcgcctccggcaccgtgaagtccagg
tgctcgcgcggacgcgccaggctcgctcccctcctgctcgacctcgacgcgacccccagc
gcgcccggtcccgggaacccgccggggcccggcaccgtccaatccccgaggtcacctcgc
ggaccacccgcgtcctga
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