Nocardioides seonyuensis: EXE58_11280
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Entry
EXE58_11280 CDS
T06627
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nsn
Nocardioides seonyuensis
Brite
KEGG Orthology (KO) [BR:
nsn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsn03032
]
EXE58_11280
03400 DNA repair and recombination proteins [BR:
nsn03400
]
EXE58_11280
Enzymes [BR:
nsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EXE58_11280
DNA replication proteins [BR:
nsn03032
]
Prokaryotic type
DNA Topoisomerases
EXE58_11280
DNA repair and recombination proteins [BR:
nsn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EXE58_11280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
QBX55985
UniProt:
A0A4P7IFE1
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All DBs
Position
2321404..2322405
Genome browser
AA seq
333 aa
AA seq
DB search
MPRLRRTSPDQPGWTRRRAGKGFVYLDEHGARLTGEDAQRCKDLVIPPAWQDVWITPHAN
GHLQAVGTDDAGRRQYLYHPQWRSSRDAAKFERIIDFGKAMSRAREKVMTDLGAEGMSLE
RACAVAVRLLDLGYFRIGNDVYTDTHGSFGLTTLLREHVSKRAGKLRFCFVGKSGIEHCI
DIDDPTVIEALDIMRRRRGGGDVLLAWKDGRQWRSLSPVQVNDYIRDTTGVEATAKDFRT
WHATVIAAAALADTKEPGQSKASRKRAIAATMREVSEFLGNTPALARSAYVDPRVVEAYE
KGRTIGTAVRRSYDTDDQRQAALERAVLRLLRS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcgcctacgtcgtacctcacccgaccagccgggatggaccagacgccgcgccggc
aagggcttcgtctacctcgacgagcacggtgcgcgcctcaccggcgaggacgcccagcgc
tgcaaggacctcgtcatccccccagcgtggcaggacgtgtggatcaccccccacgccaac
gggcacctccaggccgtcggcaccgacgacgccggccgtcggcagtacctctaccacccg
cagtggcgctccagccgcgacgctgcgaagttcgagcgcatcatcgacttcggcaaggcg
atgtcccgggcgcgggagaaggtgatgaccgacctcggcgccgaggggatgagcctggag
cgggcctgtgcggtcgcggtgcggctgctcgacctcggctacttccgcatcggcaacgac
gtctacaccgacacccacgggtccttcgggctgacgaccctgctccgcgagcacgtgagc
aagcgggcggggaagctcaggttctgcttcgtcgggaagtccggcatcgagcactgcatc
gacatcgacgacccgaccgtcatcgaggcgctcgacatcatgcgccggcgccgcggcggc
ggcgacgtcctgctggcgtggaaggacggacgccagtggcgcagcctgagccccgtgcag
gtcaacgactacatccgcgacacgaccggcgtcgaggcgaccgccaaggacttccgcacc
tggcacgccaccgtcatcgccgccgctgcgctggccgacaccaaggagcccggtcagtcg
aaggcgtcccgcaagcgcgcgatcgcggccacgatgcgtgaggtctccgagttcctcggc
aacaccccggcgctggcgcggtcggcgtacgtcgacccgcgcgtcgtcgaggcctacgag
aagggtcggaccatcgggaccgccgtgcgccgcagctacgacaccgacgaccagcggcag
gccgccctcgagcgcgcggtcctgcgactgctgcgctcctga
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