Nocardioides seonyuensis: EXE58_12500
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Entry
EXE58_12500 CDS
T06627
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nsn
Nocardioides seonyuensis
Pathway
nsn03420
Nucleotide excision repair
nsn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EXE58_12500 (pcrA)
03430 Mismatch repair
EXE58_12500 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsn03400
]
EXE58_12500 (pcrA)
Enzymes [BR:
nsn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EXE58_12500 (pcrA)
DNA repair and recombination proteins [BR:
nsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EXE58_12500 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
EXE58_12500 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
QBX56208
UniProt:
A0A4P7IG73
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All DBs
Position
2576052..2578445
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AA seq
797 aa
AA seq
DB search
MSTTQVTPDSRLLEGLNDPQRAAVTHAGAPLLVVAGAGSGKTRVLTRRIAWLIDERKAHP
GSILAITFTNKAAAEMKERVEDLVGKRARIMWVSTFHSACVRILRKEIAGLDIGGGGFKS
NFSIYDAADSKRLMTLVLRDLDLDPKRYQPSAVLHWVSDHKNELRDPDDAVKDAKNGFEE
AYASAYVNYQRRLREANALDFDDLIMTTVQMFQAFPDIRENYRRRFRHVLVDEYQDTNHA
QYSLIHQLCGQSLEEHDEALAGGAERVPPSELMVVGDADQSIYAFRGADIRNILDFEQDF
PDARTILLEQNYRSTQTILNAANAVIGNNRGRTPKRLWSDAGDGERIVGFVADDGYDEAR
FVSEEIDRLVDEHGLRPADVAVFYRTNAQSRAFEEVFIRTGQPYKVVGGVRFYERREVRD
ALAYLRVLVNTADEVSLRRILNTPKRGIGERAEACVAALADRERVTFWEALVRAEEAPGL
ATRSLKNIQAFVGIIQELQSMVAADERPDVILESVLERSGYLAELEASDDPQDDTRVENL
AELVAVAREFAEDPQPGPSADPAEVEAGTVAVGLGDFLERVALVADADQIPDSPDGDDSG
VVTLMTLHTAKGLEFPVVFLTGLEDGVFPHQRSLGDQPELEEERRLAYVGLTRAQQRLHV
SRALVRSAWGAPVHNPASRFLDELPVDLVDWRRTASAQTQWGRPDLSSGQGAPLGSPTAT
GRRNFSSAALRADAAAKAKPAREIPQLDPGDRVLHDSFGMGTVVSVEGAAEKAVASIDFG
SEGVKRLLLRYAPVEKL
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccacacaagtgacccccgactcccgcctcctcgagggcctcaacgacccccag
cgcgccgccgtgacccatgcgggggccccgctcctggtggtcgccggagcagggtcgggc
aagacgcgggtcctcacccggcggatcgcctggttgatcgacgagcgcaaggcccacccg
ggctccatccttgccatcaccttcaccaacaaggccgcggccgagatgaaggagcgggtg
gaggacctcgtcggcaagcgcgcccggatcatgtgggtctcgacgttccactccgcctgc
gtgcgcatcctccgcaaggagatcgcgggcctggacatcgggggaggcggcttcaagtcc
aacttctcgatctatgacgccgccgactccaagcggctgatgacactggtgctgcgcgac
ctcgacctcgaccccaagcgctaccagccgagtgcggtcctgcactgggtctccgaccac
aagaacgagctgcgtgatcccgacgacgccgtcaaggacgccaagaacggcttcgaggag
gcctacgcatcggcctacgtgaactaccagcgccgcctccgcgaggccaacgcgctcgac
ttcgacgacctgatcatgaccacggtccagatgttccaggccttccccgacatccgcgag
aactaccgccggcgcttccgccacgtcctcgtcgacgagtaccaggacaccaaccacgcc
cagtactccctgatccaccagctctgcggccagtcgctggaggagcacgacgaggccctc
gccggcggcgccgagcgggtgccgcccagcgagctgatggtcgtgggtgacgccgaccag
tcgatctacgccttccgcggcgccgacatccgcaacatcctcgacttcgagcaggacttc
cccgacgccaggacgatcctgctcgagcagaactaccgctcgacccagaccatcctcaac
gccgcaaacgcagtcatcggcaacaaccgcgggcgcacgcccaagcggctgtggtccgac
gcgggcgacggggaacgcatcgtgggcttcgtggccgacgacggctacgacgaggcccgg
ttcgtcagcgaggagatcgaccggctcgtcgacgagcacggcctgcgccctgccgacgtc
gcggtcttctaccgcaccaacgcccagtcgcgcgccttcgaggaggtcttcatccgcacg
ggccagccctacaaggtggtcggtggggtgcgcttctacgagcggcgcgaggtccgcgac
gccctggcctacctgcgcgtgctggtgaacaccgctgacgaggtgtccctgcgacgcatc
ctcaacacccccaagcgcgggatcggcgagcgggccgaggcgtgcgtcgccgcgctggcc
gatcgcgagcgggtcacgttctgggaggccctggtgcgcgcagaggaggctcccgggctg
gcgacgcggagcctgaagaacatccaggcgttcgtcggcatcatccaggagctccagtcg
atggtggctgcggacgagcggcccgacgtgatcctcgagtccgtcctcgagcgctcgggc
tacctcgccgagctcgaggcgagcgacgacccccaggacgacaccagggtcgagaacctc
gccgagctggtggccgtcgcccgggagttcgccgaggacccgcagccggggccgagcgcc
gaccccgctgaggtggaggccggcacggtggccgtcgggctcggtgacttcctcgagcgc
gtcgccctggtggccgacgccgaccagatccccgactcgcccgacggcgacgacagcggt
gtggtcaccctgatgacgctccacacggccaaggggctggagttcccggtcgtgttcctg
accggcctcgaggatggcgtgttcccgcaccagcgctcgctcggcgaccagcccgagctc
gaggaggagcgccgccttgcctacgtcggcctcacccgggcccagcagcgcctccacgtg
tcacgtgcgctggttcgttccgcgtggggagctcccgtccacaaccccgcgagccggttc
ctcgacgagctcccggtcgacctcgtcgactggcgccgtacggcatcggcacagacgcag
tggggtcgccccgacctgtcctcgggtcagggagcgccactcggcagccccaccgcgacc
ggtcgccgcaacttcagctcagccgcgctgcgggcggacgcggcggcgaaggccaagccg
gcgcgcgagatcccccagctcgacccgggcgaccgcgtcctgcacgactcgttcgggatg
ggaacagtcgtctcggtcgaaggagccgccgagaaggccgtcgcctcgatcgacttcggg
tccgagggcgtcaagcggctgctgctgcgctacgcgccggtggagaagctctga
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