KEGG   Nocardioides seonyuensis: EXE58_16375
Entry
EXE58_16375       CDS       T06627                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
nsn  Nocardioides seonyuensis
Pathway
nsn03030  DNA replication
nsn03410  Base excision repair
nsn03420  Nucleotide excision repair
nsn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:nsn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EXE58_16375 (polA)
   03410 Base excision repair
    EXE58_16375 (polA)
   03420 Nucleotide excision repair
    EXE58_16375 (polA)
   03440 Homologous recombination
    EXE58_16375 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:nsn03032]
    EXE58_16375 (polA)
   03400 DNA repair and recombination proteins [BR:nsn03400]
    EXE58_16375 (polA)
Enzymes [BR:nsn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EXE58_16375 (polA)
DNA replication proteins [BR:nsn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     EXE58_16375 (polA)
DNA repair and recombination proteins [BR:nsn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     EXE58_16375 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EXE58_16375 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N 5_3_exonuc DNA_polI_exo1 DNA_pol_A_exo1 Imm50
Other DBs
NCBI-ProteinID: QBX56863
UniProt: A0A4P7IJC2
LinkDB
Position
3368767..3371466
AA seq 899 aa
MPETSETTRPRLLLLDGHSLAYRAFFALPVENFTTGTGQHTNAVYGFTSMLVNVLRDEVP
THVAVAFDKSRQTFRLEEYPEYKAKRNKTPGEFSSQLPLIQRMLDTLSITHLEVEGYEAD
DIIATLTTQALAEGMEVLILTGDRDSIQLVTESSTVLYPMRGVSDLARLTPAYVEDKYGV
PPHRYPELAAIVGETSDNLPGVPGVGQGYAAKWINQYDGLDNVIARADEITGKKGEALRE
HLGDVIRNRRLNALVCDLTLPVRPGETVRQPWDRSAGLALLDELEFRGELRTRLMDTIDP
TSETEVADGGFELDGVRLAEGGVSGWLAEHAADGSRVGMAVQGSWRAGTGDVVSIALATG
SGAAAWIDVSDISPEDDAALAAWLADGSRPKVLHDAKGPTLALAARGWELRGLAVDTALA
AYLVQPDQRSYDLADLTLRHLKRELRQETGDADQLSFEALGDTTASDIAMLTARAVLDLA
DTLGETVEEHGGTALLADVELPLVGTLVRMEQRGIAVDTDHLESLESEFGDQVKAAAEDA
YAVIGKEINLGSPKQLQVVLFDELDMPKTKRTKTGYTTDADALQSLYEKTEHPFLQHLLR
HRDVIRLRQTVEGLLKTVAPDGRIHTTYNQIIAATGRLSSTDPNLQNIPIRTEAGRRIRE
GFVVGEGNESLMTADYSQVEMRIMAHLSEDDLLIEAFRSGQDFHSMTAARVFDTPADEVT
VEQRAKIKAMNYGLAYGLSAFGLSQQLRIEASEARALMDEYFETFGGIRDYLGGIVAEAR
RSGFTETIMGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADLIKVAMLGVEQAILDQ
GLASRMLLQVHDELVLEVAPGESEALAALVRKEMGQAAELAVPLDVSIGTGRSWHDAAH
NT seq 2700 nt   +upstreamnt  +downstreamnt
gtgcctgagacgagtgagacgacccggccccgactcctgttgctcgacggccactcactg
gcctaccgcgcgttcttcgcgctgcccgtggagaacttcaccaccggcaccggtcagcac
accaacgccgtctacggcttcacctcgatgctcgtcaacgtgctgcgggacgaggtgccc
acccacgtggcggtcgcgttcgacaagtcgcggcagactttccggctggaggagtacccg
gagtacaaggccaagcgcaacaagacccccggagagttcagcagccagctcccgttgatc
cagcgcatgctcgacacgttgagcatcacccacctcgaggtcgagggctacgaggccgac
gacatcatcgccaccctcacgacccaggctctcgccgaggggatggaggtgctgatcctc
accggtgaccgcgactcgatccagctcgtcaccgagagctcgaccgtcctctatccgatg
cgcggtgtgagcgacctcgcccggctcaccccggcctacgtcgaggacaagtacggcgtc
ccgccccaccgctaccccgagctggcggcgatcgtgggggagacctccgacaacctgccc
ggcgtgcccggggtcggccagggctacgccgccaagtggatcaaccagtacgacggcctc
gacaacgtcatcgcccgggcggacgagatcacgggcaagaagggcgaggcgctgcgcgag
cacctgggtgacgtgatccgcaacaggcgtctcaacgccctcgtgtgcgacctgaccctc
cccgtgcggcctggggagaccgtgcgacagccgtgggacaggtccgcagggctcgccctg
ctcgacgagctcgagttccgcggcgagctgcgcaccaggctcatggacaccatcgacccg
acgtcggagaccgaggtggccgacgggggcttcgagctggacggcgtgcggctggccgag
ggaggcgtgtccggctggctcgccgagcatgccgcggacggctcccgtgtcgggatggcc
gtgcagggctcgtggagggccggcaccggcgacgtcgtctcgatcgcgttggcgactgga
tcgggggcggccgcctggatcgacgtctccgacatctcccctgaggatgacgctgccctc
gccgcctggctcgccgacggctcccgccccaaggtcctccacgacgccaagggaccgacg
ctcgcgctcgccgcgcgcggctgggagctccgcggcctggcggtcgacaccgcgctggcc
gcctacctcgtgcagcccgaccaacgctcctacgacctggccgacctcaccctgcgccat
ctcaagcgtgagctccggcaggagaccggtgacgccgaccagctgagcttcgaggccctc
ggcgacaccacggcgagcgacatcgccatgctgacggcgcgggccgtgctcgacctggcc
gacaccctgggcgagacggtcgaggagcacggtggcaccgccctgctggccgacgtggag
ctgccgctcgtcggcaccctcgtgcggatggagcagcgtggcatcgccgtcgacaccgat
cacctggagtccttggagtcggagttcggagaccaggtcaaggccgctgccgaggacgcc
tacgccgtcatcggcaaggagatcaacctggggtcgcccaagcagctgcaggtggtgctg
ttcgacgagctcgacatgcccaagaccaagcgcaccaagacgggttacacgaccgacgcc
gatgccctccagtctctctacgagaagaccgagcacccgttcctccagcacctcctgcgg
caccgtgacgtgatccgcctgcggcagaccgtcgagggcctgctgaagacggtggcgccc
gacggccggatccacaccacctacaaccagatcatcgcggcgaccggacgcctctcgagc
accgaccccaacctgcagaacatccccatccgtaccgaggcggggcgacggatccgggag
gggttcgtcgtgggcgagggcaacgagtccctcatgacggccgactacagccaggtggag
atgcgcatcatggctcacctgtccgaggacgacctgctcatcgaggcgttccgctcgggg
caggacttccactcgatgacggccgcgcgggtcttcgacaccccggccgacgaggtgacc
gtggagcagcgcgccaagatcaaggcgatgaactacggcctcgcctacggcctctccgcg
ttcggcctgtcccagcagctccgcatcgaggcgagcgaggcgcgcgccctcatggacgag
tacttcgagaccttcggcggcatccgtgactacctcggcggcatcgtcgccgaggctcgc
cgctcgggcttcaccgagacgatcatgggccgccggcgctacctgcccgacctgacgagc
gacaaccggcagcgccgcgagatggccgagcgcatggcgctcaacgccccgatccagggc
tcggccgccgacctgatcaaggtcgcgatgctgggggtcgaacaggccatcctcgaccag
gggctcgcctcacggatgctcctgcaggtccacgacgagctcgtgctcgaggtggctccc
ggggagagcgaggcgctggcggcgctggtccgcaaggagatgggtcaggcagccgagctc
gccgtcccgctggacgtctccatcggcaccggccgcagctggcacgacgccgctcactga

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