Nocardioides seonyuensis: EXE58_16375
Help
Entry
EXE58_16375 CDS
T06627
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nsn
Nocardioides seonyuensis
Pathway
nsn03030
DNA replication
nsn03410
Base excision repair
nsn03420
Nucleotide excision repair
nsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EXE58_16375 (polA)
03410 Base excision repair
EXE58_16375 (polA)
03420 Nucleotide excision repair
EXE58_16375 (polA)
03440 Homologous recombination
EXE58_16375 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsn03032
]
EXE58_16375 (polA)
03400 DNA repair and recombination proteins [BR:
nsn03400
]
EXE58_16375 (polA)
Enzymes [BR:
nsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EXE58_16375 (polA)
DNA replication proteins [BR:
nsn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
EXE58_16375 (polA)
DNA repair and recombination proteins [BR:
nsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
EXE58_16375 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EXE58_16375 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
Imm50
Motif
Other DBs
NCBI-ProteinID:
QBX56863
UniProt:
A0A4P7IJC2
LinkDB
All DBs
Position
3368767..3371466
Genome browser
AA seq
899 aa
AA seq
DB search
MPETSETTRPRLLLLDGHSLAYRAFFALPVENFTTGTGQHTNAVYGFTSMLVNVLRDEVP
THVAVAFDKSRQTFRLEEYPEYKAKRNKTPGEFSSQLPLIQRMLDTLSITHLEVEGYEAD
DIIATLTTQALAEGMEVLILTGDRDSIQLVTESSTVLYPMRGVSDLARLTPAYVEDKYGV
PPHRYPELAAIVGETSDNLPGVPGVGQGYAAKWINQYDGLDNVIARADEITGKKGEALRE
HLGDVIRNRRLNALVCDLTLPVRPGETVRQPWDRSAGLALLDELEFRGELRTRLMDTIDP
TSETEVADGGFELDGVRLAEGGVSGWLAEHAADGSRVGMAVQGSWRAGTGDVVSIALATG
SGAAAWIDVSDISPEDDAALAAWLADGSRPKVLHDAKGPTLALAARGWELRGLAVDTALA
AYLVQPDQRSYDLADLTLRHLKRELRQETGDADQLSFEALGDTTASDIAMLTARAVLDLA
DTLGETVEEHGGTALLADVELPLVGTLVRMEQRGIAVDTDHLESLESEFGDQVKAAAEDA
YAVIGKEINLGSPKQLQVVLFDELDMPKTKRTKTGYTTDADALQSLYEKTEHPFLQHLLR
HRDVIRLRQTVEGLLKTVAPDGRIHTTYNQIIAATGRLSSTDPNLQNIPIRTEAGRRIRE
GFVVGEGNESLMTADYSQVEMRIMAHLSEDDLLIEAFRSGQDFHSMTAARVFDTPADEVT
VEQRAKIKAMNYGLAYGLSAFGLSQQLRIEASEARALMDEYFETFGGIRDYLGGIVAEAR
RSGFTETIMGRRRYLPDLTSDNRQRREMAERMALNAPIQGSAADLIKVAMLGVEQAILDQ
GLASRMLLQVHDELVLEVAPGESEALAALVRKEMGQAAELAVPLDVSIGTGRSWHDAAH
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagacgagtgagacgacccggccccgactcctgttgctcgacggccactcactg
gcctaccgcgcgttcttcgcgctgcccgtggagaacttcaccaccggcaccggtcagcac
accaacgccgtctacggcttcacctcgatgctcgtcaacgtgctgcgggacgaggtgccc
acccacgtggcggtcgcgttcgacaagtcgcggcagactttccggctggaggagtacccg
gagtacaaggccaagcgcaacaagacccccggagagttcagcagccagctcccgttgatc
cagcgcatgctcgacacgttgagcatcacccacctcgaggtcgagggctacgaggccgac
gacatcatcgccaccctcacgacccaggctctcgccgaggggatggaggtgctgatcctc
accggtgaccgcgactcgatccagctcgtcaccgagagctcgaccgtcctctatccgatg
cgcggtgtgagcgacctcgcccggctcaccccggcctacgtcgaggacaagtacggcgtc
ccgccccaccgctaccccgagctggcggcgatcgtgggggagacctccgacaacctgccc
ggcgtgcccggggtcggccagggctacgccgccaagtggatcaaccagtacgacggcctc
gacaacgtcatcgcccgggcggacgagatcacgggcaagaagggcgaggcgctgcgcgag
cacctgggtgacgtgatccgcaacaggcgtctcaacgccctcgtgtgcgacctgaccctc
cccgtgcggcctggggagaccgtgcgacagccgtgggacaggtccgcagggctcgccctg
ctcgacgagctcgagttccgcggcgagctgcgcaccaggctcatggacaccatcgacccg
acgtcggagaccgaggtggccgacgggggcttcgagctggacggcgtgcggctggccgag
ggaggcgtgtccggctggctcgccgagcatgccgcggacggctcccgtgtcgggatggcc
gtgcagggctcgtggagggccggcaccggcgacgtcgtctcgatcgcgttggcgactgga
tcgggggcggccgcctggatcgacgtctccgacatctcccctgaggatgacgctgccctc
gccgcctggctcgccgacggctcccgccccaaggtcctccacgacgccaagggaccgacg
ctcgcgctcgccgcgcgcggctgggagctccgcggcctggcggtcgacaccgcgctggcc
gcctacctcgtgcagcccgaccaacgctcctacgacctggccgacctcaccctgcgccat
ctcaagcgtgagctccggcaggagaccggtgacgccgaccagctgagcttcgaggccctc
ggcgacaccacggcgagcgacatcgccatgctgacggcgcgggccgtgctcgacctggcc
gacaccctgggcgagacggtcgaggagcacggtggcaccgccctgctggccgacgtggag
ctgccgctcgtcggcaccctcgtgcggatggagcagcgtggcatcgccgtcgacaccgat
cacctggagtccttggagtcggagttcggagaccaggtcaaggccgctgccgaggacgcc
tacgccgtcatcggcaaggagatcaacctggggtcgcccaagcagctgcaggtggtgctg
ttcgacgagctcgacatgcccaagaccaagcgcaccaagacgggttacacgaccgacgcc
gatgccctccagtctctctacgagaagaccgagcacccgttcctccagcacctcctgcgg
caccgtgacgtgatccgcctgcggcagaccgtcgagggcctgctgaagacggtggcgccc
gacggccggatccacaccacctacaaccagatcatcgcggcgaccggacgcctctcgagc
accgaccccaacctgcagaacatccccatccgtaccgaggcggggcgacggatccgggag
gggttcgtcgtgggcgagggcaacgagtccctcatgacggccgactacagccaggtggag
atgcgcatcatggctcacctgtccgaggacgacctgctcatcgaggcgttccgctcgggg
caggacttccactcgatgacggccgcgcgggtcttcgacaccccggccgacgaggtgacc
gtggagcagcgcgccaagatcaaggcgatgaactacggcctcgcctacggcctctccgcg
ttcggcctgtcccagcagctccgcatcgaggcgagcgaggcgcgcgccctcatggacgag
tacttcgagaccttcggcggcatccgtgactacctcggcggcatcgtcgccgaggctcgc
cgctcgggcttcaccgagacgatcatgggccgccggcgctacctgcccgacctgacgagc
gacaaccggcagcgccgcgagatggccgagcgcatggcgctcaacgccccgatccagggc
tcggccgccgacctgatcaaggtcgcgatgctgggggtcgaacaggccatcctcgaccag
gggctcgcctcacggatgctcctgcaggtccacgacgagctcgtgctcgaggtggctccc
ggggagagcgaggcgctggcggcgctggtccgcaaggagatgggtcaggcagccgagctc
gccgtcccgctggacgtctccatcggcaccggccgcagctggcacgacgccgctcactga
DBGET
integrated database retrieval system