Nocardioides seonyuensis: EXE58_19210
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Entry
EXE58_19210 CDS
T06627
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nsn
Nocardioides seonyuensis
Pathway
nsn03030
DNA replication
nsn03430
Mismatch repair
nsn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nsn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EXE58_19210 (dnaE)
03430 Mismatch repair
EXE58_19210 (dnaE)
03440 Homologous recombination
EXE58_19210 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nsn03032
]
EXE58_19210 (dnaE)
03400 DNA repair and recombination proteins [BR:
nsn03400
]
EXE58_19210 (dnaE)
Enzymes [BR:
nsn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EXE58_19210 (dnaE)
DNA replication proteins [BR:
nsn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EXE58_19210 (dnaE)
DNA repair and recombination proteins [BR:
nsn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EXE58_19210 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QBX57744
UniProt:
A0A4P7IK16
LinkDB
All DBs
Position
complement(3951189..3954737)
Genome browser
AA seq
1182 aa
AA seq
DB search
MSAGSSDSFAHLHVHTEYSMLDGAARLKDLAERAASLGMPAIAMTDHGNVFGAYEFYRQC
KAAGVKPIIGMEAYFTPNISRFERKRVNFYKGGPDDVSSRGAYTHMTLLSESTEGMHNLF
RLSTGAWRDGFFQHPRADRELLAQHSRGIIGTTGCPSGEVQVHLRHDNYAAARQTAADYQ
DILGRDNYFLELMDHGLDIERRVREGLLRLARDLQIPLLATNDSHYVHEADAPSQEHLLC
INSGSTMDIPAGDGPGQRFAFNGTSYYIKTAAEMRELWRDLPEACDNTLLIAERCDVAFT
EGNGTYMPRFPCPEGENEDSWLVKEVERGLLVRYPGGVPDHVRKQAEFELGVITQMGFPG
YFLVVADFINWAKDNGIRVGPGRGSGAGSMVAYALRITDLDPLEHGLIFERFLNPDRVSM
PDFDIDFDERRRGEVIKYVTEKYGDDRVSYIVTYGTIKAKQAVKDSSRILAYPFAMGDRI
TKAMPAAVMGKDVPLKEIFNPEHKRYGEGGEFRALYDGDADVRRVVDTAMGIEGLKRQWG
VHAAGVIMSSEPLIDVIPLLKRPADGAMITQFDYPTCESLGLIKMDFLGLRNLTVLDDAV
KNIKTNCGEDLVLEELELTDPKTYELLQRGDTLGVFQLDGGPMRALLRSMRPDTFEDISA
VGALYRPGPMGADSHNKYARRKTGREPVEPIHPELAEALKDILGETYGLIVYQEQVMAIA
QKLAGYTLGQADLLRRAMGKKKKEELDKQFETFSGGMQERGYSPAAIKTLWDILLPFSDY
AFNKAHSAAYGVVSYYTAYLKANYPAEYMAALLTSVKDDKDKMAIYLNECRRMKIQVLPP
DVNESHANFTPVGRDIRFGLTAVRNVGGNVVEGIVSAREEKGRYADFNDFMEKVPALVCN
KRVIESLVKAGAFDEMKHRRRALVTIHESAVDQYVDIKKNEAIGQDSLFGGMEDDDSGFG
VSVAIPEIDEWDKMTLLGHEREMLGLYVSDHPLLGLEHVLSQGTDTSIGALMLDEERAHG
STITVSGLITSVQRKITKRGDAWATITLEDLDGAIEVLLFPSSYQLASTLLVEDAIVRVK
GQLSRDKDQPEIRAQEVTSPDISTGPTGPVVISLPSTRCTAPVVEQLKDVLGTHPGMTEV
QLRLLTRASTKVLKLDDRLRVTPSPALFADLKQLLGPGCLTG
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggctccagcgactccttcgcccacctgcacgtccacaccgagtactccatg
ctcgacggcgccgcccggttgaaggacctggccgagcgcgcggcgagcctgggcatgccg
gccatcgccatgaccgaccacggcaacgtgttcggggcctatgagttctacaggcagtgc
aaggccgccggggtgaagcccatcatcggcatggaggcctacttcacccccaacatcagc
cgcttcgagcgcaagcgcgtcaacttctacaagggcggtcccgacgacgtctctagccgc
ggcgcctacacccacatgacgctgctctccgagtccaccgagggcatgcacaacctcttc
cggctctcgaccggggcctggcgtgacgggttcttccagcacccgcgagccgatcgtgag
ctcctcgcgcagcactctcgcggcatcatcggcacgaccggttgcccgagcggcgaggtg
caggtccacctgcgccacgacaactacgccgctgcgcgccagaccgcggccgactatcag
gacatcctgggccgcgacaactacttcctcgagctgatggaccacggtctcgacatcgag
cgccgggtccgcgaggggctcctgcggctcgcccgtgacctgcagatcccgctgctcgcg
accaacgactcccactacgtccacgaggccgatgctccgagccaggagcacctgctctgc
atcaactccggctccacgatggacatcccggccggcgacggccccggccagcgcttcgcc
ttcaacggcaccagctactacatcaagaccgcggccgagatgcgcgagctctggcgcgac
ctccccgaggcgtgcgacaacaccctgctcatcgccgagcgctgcgacgtcgccttcacc
gagggcaacggcacctacatgccgcgcttcccctgtcccgagggagagaacgaggactcc
tggctggtcaaggaggtcgagcgagggctgctcgtccgctatcccggcggcgtcccagat
cacgtccgcaagcaggccgagttcgagctcggcgtcatcacccagatgggcttcccgggt
tacttcctcgtcgtcgccgacttcatcaactgggccaaggacaacggcatccgggtgggt
ccgggtcgtggctccggggcgggctcgatggtcgcctacgcgctgcgcatcaccgacctc
gacccgctcgagcacgggctgatcttcgagcgcttcctcaaccccgaccgggtctcgatg
cccgacttcgacatcgacttcgacgagcgccgtcgtggcgaggtcatcaagtacgtcacc
gagaagtacggcgacgaccgggtgtcctacatcgtcacctacggcacgatcaaggccaag
caggccgtcaaggactccagccgcatcctcgcctaccccttcgccatgggcgaccggatc
accaaggcgatgccggccgcggtcatgggcaaggacgtcccgctcaaggagatcttcaac
cccgagcacaagcgctacggcgagggtggcgagttccgagccctctacgacggtgacgcc
gacgtgcgccgggtcgtcgacaccgcgatgggcatcgagggcctcaagcgccagtggggg
gtccacgcggcgggcgtgatcatgtccagcgagccgctgatcgacgtgatccccctgctg
aagcgcccggccgacggggcgatgatcacccagttcgactaccccacgtgcgagtccctg
ggcctgatcaagatggacttcctggggctgcgcaacctcaccgtcctcgacgacgcggtc
aagaacatcaagaccaactgcggtgaggacctcgtcctcgaggagctcgagctcaccgac
cccaagacctacgagctgctccagcgcggcgacacgctgggtgtcttccagctcgacggt
ggtccgatgcgtgccctgctgcggtcgatgcggcccgacaccttcgaggacatctcggcc
gtcggtgccctctaccgacctggcccgatgggggccgactcccacaacaagtacgcccgc
cgcaagaccggtcgcgagccggtggagccgatccaccccgagctcgctgaggccctcaag
gacatcctcggcgagacctacggcctgatcgtctaccaggagcaggtcatggcgatcgcg
cagaagctggcgggctacacgctcggccaggccgacctgctgcgacgcgccatgggcaag
aagaagaaggaggagctggacaagcagttcgagaccttctccggcggcatgcaggagcgc
ggctactcaccggctgccatcaagacgctctgggacatcctgctgcccttctccgactac
gccttcaacaaggcccactccgcggcctacggggtggtcagctactacaccgcctacctc
aaggccaactacccggctgaatacatggccgcgctcctgacgtcggtgaaggacgacaag
gacaagatggcgatctacctcaacgagtgtcgccggatgaagatccaggtcctgccgccc
gacgtgaacgagtcccacgccaacttcaccccggtcggccgcgacatccggttcgggctg
acggcggtccgcaacgtcggcggcaacgtcgtggaggggatcgtctcggcgcgggaggag
aaggggcgatacgccgacttcaacgacttcatggagaaggtcccggcgctggtctgcaac
aagcgtgtgatcgagtccctggtcaaggccggcgcgttcgacgagatgaagcacaggcgt
cgcgccctggtgacgatccacgagtccgccgtcgaccagtacgtcgacatcaagaagaac
gaggcgatcggccaggactcgctcttcggggggatggaggacgacgactccggcttcggt
gtctcggtggcgatccccgagatcgacgagtgggacaagatgacgttgctcggccacgag
cgcgagatgctcgggctctacgtctccgaccaccccctcctcggtctcgagcacgtcctg
tcgcagggcaccgacaccagcatcggcgcgctgatgctcgacgaggagcgtgcccacggc
tcgacgatcacggtgagcggtcttatcacctccgtccaacgcaagatcaccaagcgcggt
gacgcttgggcgacgatcacgctggaggacctcgacggcgccatcgaggtgctgctgttc
cccagctcctaccagctcgcgtcgacgctgctcgtcgaggacgcgatcgtccgggtcaag
ggccagctctcgcgtgacaaggaccaacccgagatcagggcacaggaggtcacctcacct
gacatctcgaccgggcccaccggtccggtggtgatcagcctcccctcgacccgctgcact
gctccggtggtcgagcagctgaaggacgtcctcggcacccaccccggcatgaccgaggtg
cagctgcgcctcctcacccgggcatccaccaaggtcctcaagctcgacgaccggctgcgc
gtgacgcccagtccggccctgttcgccgacctcaagcagctcctggggcctggatgcctg
actggctga
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integrated database retrieval system
