Niabella soli: NIASO_00185
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Entry
NIASO_00185 CDS
T03682
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
nso
Niabella soli
Pathway
nso03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
NIASO_00185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nso03400
]
NIASO_00185
DNA repair and recombination proteins [BR:
nso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
NIASO_00185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MSSS
PK
Exonuc_VII_L
Motif
Other DBs
NCBI-ProteinID:
AHF14039
UniProt:
W0EXW1
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All DBs
Position
45079..47187
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AA seq
702 aa
AA seq
DB search
MKLYPESAYIQLEFDKIRTLVLQRCETDYGRQKAEQLRIHTHKKFIDAALKESHEFKQLI
QNGVYFPNDYILNLAKELKLLSIPGALLTGEQLIQIRKLAESIEKIFRWFDAERKGAYEG
LYSVIKETYYEKAIIGLIDEVIDEIGQVKDSASPELKEIRMELYRKRNELRRVFDRIVSK
LNKQGYLAEIEESFMNGRRVIAVFAEQKRTVKGILHRESDSRKTAFIEPEETIHLNNEVS
DLEHEEHREIDRILRQLTARLASYSALLVTYHAIVGEYDFIRAKAKFAIEINGEAPIVQD
KAQVHLVNAVHPLLYLYNKKTQKQTFPVSVTLDESQRILLISGPNAGGKTVTMKTVGLLQ
MMVQSGLLVPVHPNSEFGIFKQLMIHIGDTQSLEFELSTYSSHLLHMKYFIEHANGKTLF
FIDELGSGSDPNLGGAFAEVILLELLKKHSYGIVTTHYLNLKIMAGKTHGIVNGAMAFDE
KNLQPLFHLVVGRPGSSYTFSIAERIGLDKRLISQARQMVDDDQYRLDKLLNRTEQNLRD
LTKKDKELERLIKENERLKKEMEHVMDKEKHRQQLNVLREQNKISEDRIAYLKDMERKLK
QITLEWKKEEDKQKLIKTINNLLFNRDEKKAVNKIQKKIESKYKEVGGEIKPGDKVKMKR
NHQVGEVLELKGKRAVVKIGLLPMQVDLNDLVVVQEKETTAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgaaattatatccggaatcggcttatatacaactggagtttgacaagatcagaacgctg
gtactgcagcgttgcgaaacggactatggccggcaaaaggcagagcagttgcgcattcat
acacataagaaatttattgatgccgcattaaaagaatcgcatgagtttaagcaactgatc
cagaacggggtttattttcccaatgattatatcctgaatcttgcaaaagaattaaaatta
ttatcaatacctggcgccctgctcaccggcgagcagttgatccagatacgcaaactggcc
gaaagcattgaaaagatctttcgctggtttgatgccgaacgcaaaggcgcttacgaaggc
ctttattcggttattaaggagacctattacgagaaggccatcatcggattgatcgacgag
gtaattgatgagatcggccaggtgaaagattcggcatcgccagagctgaaggagatccgg
atggagttgtatcgcaagcgcaatgaattgcgccgtgtttttgaccggatcgtttcgaaa
ttgaataagcagggctaccttgcagagatcgaggagagctttatgaatggccgtcgcgtc
attgccgtctttgctgagcagaaacgtacggtaaagggtattctgcaccgcgaaagcgat
agccgcaaaacagcgtttattgagccggaagaaacgatccatttgaataatgaagtcagc
gatctggaacatgaggagcaccgggagatcgatcgcatcctgcgccaactgacagcacgc
ctggcttcttattccgcattattggtcacttatcatgccatcgttggggaatatgatttt
atcagggcaaaagcaaaatttgccatcgagatcaacggcgaagctcccattgtgcaggat
aaagcacaggtgcacctggtaaatgccgtacacccattattgtatctatacaacaaaaaa
acacaaaaacaaacgtttcctgtttccgtaaccctggatgaaagccagcggatcctgttg
atcagcggtcccaatgccgggggtaaaacggttaccatgaaaaccgtgggcctgctgcaa
atgatggtgcagagcggcttgttggtaccagtgcatcccaatagtgaatttggtattttc
aaacaactgatgatccatataggcgatacgcaaagcctggagtttgaactgagcacctac
agcagtcacttgcttcatatgaaatatttcatagagcatgctaacggtaaaacgctattt
tttattgatgaactgggcagtggcagcgatcccaacctgggcggagcttttgccgaagtg
atcctgttggagttgctgaaaaagcactcctacggcattgttaccacccattacctgaac
ctgaaaataatggccgggaaaacgcatggtatcgtaaatggtgcgatggcttttgatgaa
aagaacctgcagcctttgtttcacctggtggtaggccggccgggcagttcttatactttt
tctatagcagagcgcatcgggctggataagcggctgatcagccaggcccggcagatggtg
gatgatgaccagtaccggctggataaattattaaaccgtaccgaacaaaacctgcgggac
ctaacaaaaaaagataaggaactggagcggttgataaaagaaaatgagcgcttgaaaaaa
gagatggagcacgtgatggataaagaaaagcaccgtcagcagttgaatgtgttgcgggag
caaaataaaatttcggaagaccgcatcgcttatctgaaggatatggagcgcaagctgaaa
caaatcaccctggaatggaaaaaagaagaagacaaacaaaagctgattaagacgatcaat
aacctgctttttaatcgcgatgaaaagaaagcggtcaacaagatccagaaaaaaattgag
tccaaatacaaagaagtaggtggggagatcaaaccaggtgataaagtaaaaatgaaacgc
aatcaccaggtgggcgaagtgctggagttaaaaggcaaaagggcagtggtgaaaataggt
ctgttgccgatgcaggtagacctgaatgatctggtagtggtgcaagagaaggaaacgacg
gctgaataa
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