Niabella soli: NIASO_07990
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Entry
NIASO_07990 CDS
T03682
Name
(GenBank) hypothetical protein
KO
K01730
oligogalacturonide lyase [EC:
4.2.2.6
]
Organism
nso
Niabella soli
Pathway
nso00040
Pentose and glucuronate interconversions
nso01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nso00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
NIASO_07990
Enzymes [BR:
nso01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.6 oligogalacturonide lyase
NIASO_07990
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase22
YqgU
Motif
Other DBs
NCBI-ProteinID:
AHF15117
UniProt:
W0EWF8
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All DBs
Position
1719946..1721208
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AA seq
420 aa
AA seq
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MKQTILPLLLAITSISSFAQPVLETGPGMPAEWIDKATGHKVVRLTNNGRNNLSFYFHNN
PFVGHNMVYYSSAKTNAPRAAKVETYNAVGNDKQLYLLNLENRQSERLTNHPAPMLGEIV
SAKRNEAFYQVKDSVFAVNLSTKKERLVYVFPEDFKASITTINADGTLLAGARATDEEKQ
IFKNNPSKSDYFNKIYEAKLRRTLFTVNINTGKLDKIFSDTAWLNHIQFSPTDPALLMFC
HEGPWHKVDRIWTINVNSKEVKLIHKRTMPMEIAGHEWFSADGKKIWFDLQQPRGATFFV
GGTDLATGTETKYQLQRNEWSVHFTSSPDGKLFAGDGGDPNAVAKAPDGKWIYLFTPNGD
HFNAEKLVNMKQHNYHLEPNVHFTPDQQWILFRANFEGKEDIYAVEIKPSMVNSESMSFP
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaacgatccttccccttttattagccattacatccatttcctcctttgcacaa
cccgtactggaaacagggccgggcatgcctgcggaatggatcgacaaagctacgggccac
aaagtagtgcggttgaccaataatggccgcaacaaccttagcttttatttccacaataat
ccatttgtgggtcataacatggtatattacagcagcgcaaaaacaaatgcaccccgcgcg
gccaaggtagaaacctataacgccgttggcaacgacaagcaattatacctgttgaacctg
gagaatcgtcaatcggaacggttgaccaatcaccccgcccccatgctgggagaaatcgtt
tcagcaaaaagaaacgaggccttttaccaggtaaaggacagtgtgtttgccgtgaacctt
tccacaaaaaaagaacggttggtctatgtttttccggaagattttaaggccagcatcact
actatcaatgcggatggtacactcctggcgggggcaagagcaacggatgaagagaaacag
atattcaaaaacaatcctagcaaaagcgattacttcaataaaatttacgaagcaaaattg
cgcagaacattgtttacggtaaatattaataccggcaaactggataaaatattttcagat
acggcctggctgaatcacattcagttttccccaaccgacccggctttgttaatgttctgc
catgaaggtccctggcataaggtagatcgtatctggacaattaatgtgaactctaaagag
gtaaaactaatacacaaaagaacaatgccgatggagattgcagggcatgaatggttcagc
gcagatggcaaaaagatctggttcgatctgcagcaaccgcgtggcgccactttttttgta
ggcgggaccgacctggcaaccggcacagaaaccaaataccagttgcagcgaaatgaatgg
tcggtgcattttacctcctctcccgatggaaaattatttgccggcgatgggggtgatccg
aatgctgttgcaaaagccccggatggtaaatggatctatctgtttactccaaacggcgat
cattttaacgcagaaaagctggtaaatatgaaacagcataattatcacttggaaccgaat
gtacacttcaccccagaccagcaatggatcctgttccgggcaaattttgaaggaaaggaa
gacatttatgcagtagagataaaaccgtcaatggtcaatagtgaatcaatgtcgtttcct
tag
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