Niabella soli: NIASO_10985
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Entry
NIASO_10985 CDS
T03682
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nso
Niabella soli
Pathway
nso03030
DNA replication
nso03430
Mismatch repair
nso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NIASO_10985
03430 Mismatch repair
NIASO_10985
03440 Homologous recombination
NIASO_10985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nso03032
]
NIASO_10985
03400 DNA repair and recombination proteins [BR:
nso03400
]
NIASO_10985
Enzymes [BR:
nso01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NIASO_10985
DNA replication proteins [BR:
nso03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NIASO_10985
DNA repair and recombination proteins [BR:
nso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NIASO_10985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_5
RCF1-5-like_lid
AAA_14
Rad17
AAA_30
AAA_16
AAA_19
AAA_7
nSTAND3
AAA_2
AAA_18
RNA_helicase
Mg_chelatase
AAA_24
AAA_15
Sigma54_activ_2
NTPase_1
Mre11_C
DUF3646
AAA_lid_RFC1
TsaE
AAA_33
Motif
Other DBs
NCBI-ProteinID:
AHF15544
UniProt:
W0F230
LinkDB
All DBs
Position
2405129..2406901
Genome browser
AA seq
590 aa
AA seq
DB search
MDKFIVSARKYRPQTFDTVVGQQHITTTLKNAIKQSQLAHAFLFCGPRGVGKTTCARILA
KTINCEHATPEGEACNECNSCISFNLGTSLNIHELDAASNNSVDDIRTLVDQVRFAPQAG
KYKVYIIDEVHMLSSSAFNAFLKTLEEPPSYAIFILATTEKHKILPTILSRCQIFDFKRI
TTNDTVEHLEAICEKEGVVADKAALQTIAQKSEGCMRDALSIMDKIVSFTNGELNYNNTL
EHLNILDEDYYFRLIDLMMQQDLSGAMLLYDDINRKGFEGDLVLNGFASFIRNLLVSKDE
KVVALLDTVESFKQRYINTAKNIPPPVLISALNILNEAEIGYRAARNKRLHVELTLIKLC
YLQQAIELAAGDATLHKKKIVEQATAVPFRKIRPILAPSKDDKKAGAPGASPVKTTGARL
IIEEPKPRPEAVPAPAEAKPPARKIASLEKLRKQFKENNVEQIDIPLTQEALNAAWKDFI
VQLKENKNSAAQSFDLAQLKVLDENSFYVYTANAIEYRFVESCKTETSEFLQQKLSNSQL
QFYIIKRENKEVHESNEPKRLTAVQQYQKMIEKYPLVKELKEKLKMELDR
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggataaatttatcgtttcagccagaaaatacagaccccagacttttgatacagtagtg
gggcagcagcacatcactacaacccttaaaaatgcgatcaaacagagccagttagcacac
gcttttcttttttgcggaccgcggggggtgggcaaaacgacctgtgcgcgcattctggcc
aaaaccatcaattgtgagcatgccacacccgaaggggaggcctgtaatgaatgtaactcc
tgcatttcctttaacctgggcacttcgctgaacattcatgagctggatgccgccagtaat
aactccgttgacgatatccggacgctggtagatcaggtgcgttttgctccgcaggcggga
aaatacaaggtgtatattattgatgaggtacatatgctgagctcttctgcgtttaacgct
tttctgaaaacccttgaagagccgccctcctatgcaattttcatcctggccactaccgaa
aagcataaaattttacccaccatcctcagccgctgccagatcttcgattttaaacggatc
actaccaatgacaccgtagagcacctggaagcgatctgtgaaaaagagggcgtagtggca
gataaagcggcactgcaaaccattgcccagaaaagcgaaggctgtatgcgcgatgccctg
agcatcatggataagatcgtaagcttcaccaacggagaattgaattataataatactctt
gagcacctgaatatactggatgaagattattatttccgcctgatcgatctcatgatgcaa
caggacctctccggcgccatgctgttatatgatgacatcaaccggaaaggatttgagggc
gacctcgtattaaacggatttgcctcatttatacgcaacctgctggtaagcaaagacgaa
aaagtggtggcgctcctggataccgtggaaagctttaaacagcgctatattaatacggcc
aaaaacatacctccccccgttttgatcagcgcgctgaatattttaaacgaagcagagatc
ggctaccgcgccgcccgcaataaacggttacatgtagaactgacactgataaaattatgt
tatctgcaacaggcgatcgaactggctgccggcgatgcaacgctgcataaaaaaaaaata
gttgagcaagcaacagcagttcccttccggaagatccggcccatccttgcgccatcaaaa
gacgataagaaagcgggagcacccggcgcctcaccggtgaaaacaaccggcgcccggctg
atcattgaagagcccaaacccagacctgaagcagttcccgcgccagcggaagccaaacct
ccggcaagaaaaattgccagcctcgaaaaattaagaaaacaattcaaggaaaacaatgtt
gagcagattgatattccgctcacacaggaagcacttaatgctgcctggaaggattttatt
gttcaattaaaagaaaataaaaattcagcggcccaaagcttcgacctggcacaactcaaa
gtgctggatgaaaattctttttatgtttataccgccaatgccatagaataccgttttgtg
gaaagctgtaaaacagaaacctccgagttcctgcaacaaaaactttccaacagccagttg
caattctatattataaaaagagagaacaaggaagtacatgaaagcaatgagcccaaacgg
ttaacagcggtgcagcaataccagaaaatgattgaaaaataccccctggtaaaagaattg
aaagaaaaactgaaaatggaactggaccggtga
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