Niabella soli: NIASO_12990
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Entry
NIASO_12990 CDS
T03682
Name
(GenBank) NifR3 family TIM-barrel protein
KO
K05540
tRNA-dihydrouridine synthase B [EC:1.-.-.-]
Organism
nso
Niabella soli
Brite
KEGG Orthology (KO) [BR:
nso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nso03016
]
NIASO_12990
Transfer RNA biogenesis [BR:
nso03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
NIASO_12990
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Gene cluster
GFIT
Motif
Pfam:
Dus
PEP_mutase
IncFII_repA
Motif
Other DBs
NCBI-ProteinID:
AHF15826
UniProt:
W0F3E4
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All DBs
Position
2817077..2818117
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AA seq
346 aa
AA seq
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MIKIGNITLPDFPLLLAPMEDVSDPPFRAVCKDNGADLMYTEFISSEGLIRDAIKSRRKL
DIFDYERPVGIQIFGGDEESLSLAAKIVDVTQPDLLDINFGCPVKKVALKGAGAGVLKDV
DLMVRLTEAVVKSTTLPVTVKTRLGWDENTLNIEEVAERLQDVGIKALAIHGRTRCQMYK
GEADWALIGKVKNNPRINIPIFGNGDIDSPQKALEYKNRYGVDGIMIGRAAIGYPWIFRE
IKHFMKTGETLAPPTVEERVSVVRKHLQKSVEWKGPIVGINEMRRHYANYLKGLPNIKEY
RSKLVRLSEENAIREVLDEIIEKYSAFEIEAAPIELVNYHENCPVN
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaataggcaacataacattacccgatttcccgttactcctggcgcccatggag
gacgtaagcgatccgccattccgcgctgtatgtaaggataacggagccgatttaatgtat
acggagttcatcagcagtgaaggactgatccgcgatgcgatcaaaagccgccggaaactg
gacatattcgattatgaacggcctgtgggcatccagatcttcggtggcgacgaggaaagc
ctttcgctggcggcaaagatcgtggacgtaacccaacccgacctgctggatattaacttc
ggctgcccggtaaaaaaagtagcattaaaaggagccggagccggcgtgttaaaagatgta
gaccttatggtacgcctgaccgaggccgttgtaaaatcaacaacgctgccggtgactgta
aaaaccagactgggctgggatgaaaatacgctgaatatagaagaagtagcagaaaggcta
caggatgtgggcataaaagcattggcgatccatgggcgcacccgctgccagatgtataaa
ggtgaagccgactgggcccttattggaaaagtaaagaataacccccgtatcaatatcccc
atttttggcaatggcgatatcgacagtccgcaaaaagcactggaatataagaatcgctac
ggcgtggatggtattatgattggcagggctgctattggctatccctggatcttccgtgaa
ataaagcactttatgaaaacaggcgaaacgctggccccgcctactgttgaagaacgagtg
agcgtggtgcgcaagcatctgcagaaaagtgtggaatggaaaggacccattgtgggcatc
aatgaaatgcgccgccattatgccaactatctaaaagggctgccgaatatcaaagagtac
cggagcaagctcgtacgtctttcggaagaaaacgccattcgcgaagtattggacgaaatc
attgaaaaatattccgcttttgagattgaagccgcacctattgaactggtaaattatcac
gaaaactgcccggtgaactga
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