Niabella soli: NIASO_14640
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Entry
NIASO_14640 CDS
T03682
Symbol
ruvB
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
nso
Niabella soli
Pathway
nso03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
NIASO_14640 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nso03400
]
NIASO_14640 (ruvB)
Enzymes [BR:
nso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIASO_14640 (ruvB)
DNA repair and recombination proteins [BR:
nso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
NIASO_14640 (ruvB)
RecFOR pathway proteins
NIASO_14640 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
TIP49
AAA_16
AAA_3
Mg_chelatase
Rad17
AAA_33
AAA_18
AAA_14
TsaE
NB-ARC
nSTAND3
bpMoxR
RNA_helicase
AAA_PrkA
NPHP3_N
AAA_28
NTPase_1
AAA_17
AAA_24
Motif
Other DBs
NCBI-ProteinID:
AHF16056
UniProt:
W0F3X6
LinkDB
All DBs
Position
3177942..3178979
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AA seq
345 aa
AA seq
DB search
MSNPNLNKEKQGLTTQDSEFENSIRPGHIKDFAGQGQLIENLVIFIRAAKMRGEALDHVL
FHGPPGLGKTTLSRIVANELGVNIKETSGPVIEKPGDLAGLLTSLEPNDVLFIDEIHRLS
TVVEEYLYAAMEDYRLDILLDSGPNARSIQLSLNPFTLIGATTRSGLLTAPLLSRFAIKS
RLEYYNAETLQKIVLRAAGILDVKIAANAAMEIARRSRATPRIANGLLRRVRDFAQVLND
GIIDIGITQHALKALNVDEYGLDEMDNRILLAIIEKFKGGPVGLTTIATAVGEEPGTLEE
VYEPFLIQEGFLQRTPRGREVTHKAYEHLGKKPGNRGTTNLELDL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagtaatcccaatttaaataaggaaaaacaaggcctgaccacacaggacagtgaattt
gagaactccatccggccgggtcatattaaagatttcgccggacaagggcaattaattgaa
aacctggtcatttttatccgtgctgcgaaaatgcggggcgaagcgctggaccatgttctt
tttcatggtcctccgggattggggaaaaccaccttatcgcgtattgtggccaatgaactg
ggcgtaaatataaaagagaccagtgggcccgttattgaaaaaccgggagaccttgccggc
ttactgacatcactggagcccaatgacgtattatttatcgacgaaattcaccggctcagc
accgtggtggaagaatatttatatgcggcaatggaagattaccggctggatattctgctg
gacagcggtcctaacgcaagaagcatccagctttcactgaatcccttcaccctgatcggc
gctaccacaaggagcggtttattaacggcgccattattatccaggtttgccatcaagtcg
cgactggaatattacaatgctgaaacacttcaaaaaattgtattacgtgctgccgggata
ctggatgtaaaaattgccgccaacgccgctatggagatagcccgcagaagccgtgccacc
ccgcgtattgccaatggcctgctgcggcgggtgcgcgattttgcacaggtgctgaacgac
ggcatcattgatattggcattacccaacatgcattgaaggcattgaatgttgatgaatat
ggcctcgatgaaatggataaccgcatcctgctggccatcattgaaaaattcaaaggcggc
cccgtagggcttaccaccattgccaccgctgtgggcgaagagcccggcacccttgaagaa
gtgtacgagccttttttaatacaggaaggctttttacaaagaactccgcgcggccgcgaa
gtgacccataaagcgtatgaacatctcgggaaaaaaccggggaaccgcggaacaacgaac
ctggagctggacctttaa
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