Niabella soli: NIASO_14670
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Entry
NIASO_14670 CDS
T03682
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
nso
Niabella soli
Brite
KEGG Orthology (KO) [BR:
nso00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nso03400
]
NIASO_14670
DNA repair and recombination proteins [BR:
nso03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
NIASO_14670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA
AAA_16
TrwB_AAD_bind
FtsK_SpoIIIE
ResIII
DUF5852
AAA_30
Zot
AAA_6
T2SSE
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AHF16059
UniProt:
W0F3I5
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All DBs
Position
complement(3187900..3189429)
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AA seq
509 aa
AA seq
DB search
MADTNDFLKAVQDGYSFKGESYKIGRAMLDGKVVADADILIPFKTLNRHGLIAGATGTGK
TKTLQVLAEGLSDASIPVVLMDIKGDMSGIGAAGTENDKIKERSQLLGIDFKPGAYPVEF
LTISKEKGTRLRATVSEFGPVLLSKILDLNDTQGGFVAMIFKYCDDNKLPLLDLKDFIKI
LQYVSDEGKAELEKTYGKISTTSTGTILRKVIELQQQGADLFFGERSFDVEDLMRISDDG
RGMVSIVRVTDLQDRPKLFSTFMLQLLAELYASLPEAGDLDKPKLVLFIDEAHLIFNEAS
SALLNQLETIVKLIRSKGVGVFFCTQNPMDVPASILAQLGLKIQHALRAFTAADRKAIKE
TADNYPISPFYQTDELLTQVGIGEALITMLNEKGIPTPLVHCMLRAPQSRMDILTDAEID
AIVAKSKIAVHYNEVIDNESAYEILTKKLSDAAEKAQEAPQPGRATASQEKSILDNPIVK
SMARTAGNTIVRSLLGAIGLGGRKKSSWF
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcagatacaaatgacttccttaaagcagtgcaggatgggtatagctttaaaggagaa
agctataaaatagggcgcgcaatgctggacggcaaagtggttgcagatgccgatatcctt
atcccttttaaaacattgaaccgccacgggctgattgccggcgctaccggtaccggcaaa
accaaaaccctgcaggtgctggcggaaggtttgagcgacgccagtattccggtagtattg
atggatattaaaggggatatgagcggtattggtgccgccgggaccgaaaacgataaaata
aaagaacgcagccaattgctgggcatcgattttaagcctggggcctacccggtagagttt
cttaccataagcaaagaaaaaggaacgcgactgcgcgccacggtgagtgagtttggcccg
gtattgctctcaaaaattcttgacctgaatgatacccagggcgggtttgtggcgatgatc
tttaaatattgtgatgataacaaactgcccttactggacctgaaagattttataaaaata
ctacagtatgtcagtgatgagggcaaagccgaattagaaaaaacatatgggaaaatttca
actacttctaccggaaccattctacgtaaagtaattgagctgcaacaacagggagccgac
ctcttttttggcgaacggagcttcgatgtggaagacctgatgcgtatcagcgatgacggc
cggggtatggtttccatcgtgcgggttacggacttgcaggaccggcccaaattattttca
acgttcatgctgcaactgctggcagaattatacgcatcgctgcccgaagcgggcgacctc
gacaaaccaaagctggtattgtttattgacgaggcccatcttatttttaatgaggccagc
agtgctttgctgaatcaactggaaactattgtaaaattgatccgttccaaaggggtgggc
gtgtttttctgtacgcagaacccaatggatgtaccggcttccatattagcccagttgggt
ttgaagatacagcacgctttaagagcctttacggcagcggatcgcaaggctattaaggaa
acggcagacaactatcccatcagtcctttttaccaaacagatgagctgctcacccaggtg
gggatcggcgaagcgctgataacgatgctgaatgaaaagggtattcctacgcccctggta
cattgtatgctgcgggcgccgcaaagccggatggatatcctgactgatgcggagatcgac
gcgattgtagcaaaatctaaaattgcggttcattataacgaagtcatcgataatgaaagc
gcctatgagatcttaacgaaaaaactcagcgatgccgccgaaaaagcgcaggaagcaccg
cagccagggcgtgccaccgcctctcaagagaaaagtattttggataacccaattgtaaaa
agtatggcgcgcacggccggaaataccattgtgcgttcccttttgggcgcgattggcctg
ggcggaagaaaaaaatcaagctggttttaa
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