Niabella soli: NIASO_15105
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Entry
NIASO_15105 CDS
T03682
Name
(GenBank) helicase SNF2
Organism
nso
Niabella soli
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
AHF16117
UniProt:
W0EZC7
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All DBs
Position
complement(3280396..3284157)
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AA seq
1253 aa
AA seq
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MALPHLLKHVYTFGTDEVIRRGKKTFALGFVELIEYDKLTGSIFFRVKDDTYSTFYKVHI
QKFNDPRNISLKCNCPYNLGEVCKHEVASLFQLQELIDKGQLDDEEVYYDQRHTVVKIRS
LDVRSIRYLCAPETFNEAEKFLQKKKAKILYAQDETVRAIVSLNETDYKVAIKKNDERNF
DTSCEYEDTDHPLCLPKVIVFLQLIKQHGADYFDTIRNRDVEKNKLLEAYGYSLSDNLKG
KFEFVFKDGKPFLRVLDPKIKRINTTVLTDKPAAVQAKQQQLVEKDDVAVAETPPDRKLG
LVFDFNKSAYPFFQVHVVSGELNEAGTGFAGNTAALDITHFIDTSEYNENDINLLNAVRR
LQDIEINKYISRNTPFNTSWEEELPDAMPGKEIVQLVNEYMLPRLRRLIADAGTDALAFM
LPKGKEFVTANIEQIDIFPEPAVTEFYVDREGADAFSCDCLVRLRGMVHGVEQNESPSPL
VFLYNHQLFLFNNSETISLIEKFLPGGKMIIPASEWAATLHEFILPLAKEHKVDFDASML
HVMKNIVPEARLLLIEKGEHLVFKPQFSYKGYETDLLGKEVFLIPEGDKIMAIHRNKEKE
QAFVARLKNLHSNLIMNEENGTLSLKGTEILKDNWFFLFVDAMKEMQVPVFGYDALRNFR
FNTAKPQTKIFISSNTDWFDAKVDILFGDQQVSIAEVKRALANKQMYVQLNDGTLGVLPE
EWLKKYSLLFRVGEGANQNLKLSKYHKSVVDELFELKNEEELVFELEEKYNRLRDFEKIH
EIDPPEHLQTVLRPYQMAGFQWINYLRNVNWGGILADDMGLGKTVQALSYLEHYKQEHPD
AKILVICPTTLIYNWENEIKKFTPSLSYRIHHGPTRTRNTEDIVKQDVIITTYGTLRSDI
KLFVGIPFDYAVLDESQAIKNPASKVTKAAYLINAKHRICMSGTPLQNNTFDIYAQMNFL
NPGMLGSIEFFRQEFAIPIDKLGEADRKEHLRKLLYPFILRRTKEQVAKDLPEKQEMILW
CEMEAEQRSIYDAYRNDYRDKILGNIEAQGIGRSQMTILQGLMKLRQICDSPAILNEEES
FENHSIKIDELVREISENMGDHKALIFSQFLGMLGLIRQKMDELGIKYEYFDGSTSAPDR
EKAIQSFQKNEEVRVFLISLKAGGVGLNLTAADYVYIVDPWWNPAVEQQAIDRTHRIGQT
KNIFAYRMICKDTIEDKILKLQDKKKALAKDLISDESGFVKSLTREDVEYLFS
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
ttggcattaccacatttattaaaacacgtttacacatttggaacggatgaagtcattcgc
aggggaaagaaaacatttgcgctgggttttgttgaactgatagaatacgacaagctaacc
ggtagcatcttcttcagggtaaaagatgatacctacagcactttttacaaagtacatatt
caaaaattcaatgatcccaggaacatttccttaaaatgtaattgtccctacaacctgggc
gaagtttgcaaacatgaagtagcgtctttgttccaactgcaggagctgatcgacaaggga
cagttggatgatgaagaagtgtactacgatcagcgccatacagtggtaaagatccgcagc
ctggacgtaaggtctattcgctatctgtgtgctccggagacgtttaacgaagcagaaaaa
ttcctgcaaaaaaagaaagcaaagatcctctacgcacaggatgaaacggtacgggccatt
gtatcgttaaacgaaacggattataaagtggcgatcaaaaagaatgatgagcggaatttt
gataccagttgcgagtacgaggataccgatcatccgctttgtttgcccaaagtgatcgtg
ttccttcagttaataaaacaacatggcgccgattattttgataccatccgtaaccgggat
gttgaaaagaacaaactcctggaagcgtatggatactctttaagtgataaccttaaagga
aaatttgaatttgttttcaaagacggaaaaccttttttgcgggtattggatccaaagatc
aaaaggatcaatacgacagtgctgaccgacaagccggccgcagtacaggcaaaacaacaa
cagttggttgagaaagatgatgttgccgtggcagaaacgccccccgaccgcaaactgggg
ctggtgttcgactttaacaaatcggcctacccgtttttccaggtgcacgtagtttcgggg
gaactgaacgaagccggaacgggttttgcggggaacactgccgcgctggatattacccat
tttattgataccagcgaatataatgaaaatgacattaacctgctgaatgccgtgcgccgc
ctgcaggatatagaaatcaacaaatatatcagtcgcaatacaccgttcaatacctcctgg
gaagaagaattgccggacgcgatgcccggcaaagaaatcgtgcagctcgttaatgaatac
atgttgccccgcctgcgcaggctgatcgccgacgctggaacggatgcgctcgcgtttatg
ctcccgaaaggaaaggaatttgttacggctaatatagaacagatagatatttttcctgaa
ccggcggttacggagttttatgtggaccgcgaaggtgcagatgcctttagctgcgattgt
ttggtgcgcttaagaggcatggtgcacggggtagagcagaatgagagcccctcgccgctg
gtgttcctgtataaccaccaactgtttttatttaataattcagaaacgatcagcctgatt
gaaaaatttttacccggtggtaaaatgatcataccggcgtctgaatgggcggcaacctta
cacgagtttattctgcccctggcaaaagagcacaaggtggattttgacgcctccatgctg
catgtgatgaaaaatattgtccccgaggcccggctgctgctgatagaaaaaggggagcac
cttgtgtttaaaccacagttttcttataagggctatgaaacggaccttttggggaaagaa
gtttttctgatcccggaaggagataagatcatggccattcatcgcaataaagaaaaagaa
caagcctttgttgcacggttaaaaaaccttcattccaatttgataatgaatgaagaaaat
ggcacgctgtcattaaaaggcacagaaatattaaaagacaactggttctttttattcgtg
gatgccatgaaggaaatgcaggtgccggtgtttggatatgacgccctgcgtaactttcgt
tttaataccgccaaaccgcaaaccaaaatatttatctcgagtaatacagactggtttgat
gccaaagtggatattttatttggcgatcagcaggtatctattgccgaggtaaaacgggcg
ctggccaacaaacaaatgtatgtgcagttgaatgacggcaccctgggcgttttgccggaa
gagtggctaaagaaatactccctgttattccgcgtgggcgaaggcgccaatcaaaacctg
aagctttccaaataccataaaagcgtggtggatgagctctttgaattaaaaaatgaagaa
gagctggtgtttgagctggaagaaaaatataaccgcttgagggactttgaaaaaattcat
gagatcgacccgccggagcacctgcaaaccgtgttgcgcccttaccagatggccggcttt
cagtggatcaattacttacgcaatgtgaactggggcggcatcctggcggatgatatgggt
ttgggtaaaaccgtacaggccctttcttatctggagcattataagcaggagcacccggat
gcaaagatcctggtaatttgccccaccacgttgatctataactgggagaatgaaataaaa
aaattcacgccttccttatcctaccggatccaccacggccccacccgtacccggaatacc
gaagatatagttaaacaggatgtaattattaccacctacggaaccctgcggagcgatata
aaattatttgtgggtattcccttcgattatgcagtgctggatgaaagtcaggctattaaa
aatcctgccagcaaggttacaaaggcggcctacctcattaatgcaaaacaccgtatctgt
atgagcggtacgcccctgcagaacaatacctttgatatttacgcgcaaatgaatttcctg
aaccccggcatgctgggtagtattgaattcttccggcaggaatttgccatccccatcgat
aaactgggcgaagccgatcgaaaagaacatctgagaaaattactgtacccgtttatttta
aggcgcacaaaagagcaggtggcgaaggacctcccggaaaaacaggaaatgatcctttgg
tgcgaaatggaagccgagcaacgctccatatacgacgcttataggaacgattaccgcgat
aagatcctcggcaatattgaagcacagggcatcggccggtcgcaaatgaccattttgcag
gggctgatgaaactgcgccagatctgtgattctcccgccatcctgaatgaagaagaatcg
ttcgaaaatcattcgataaaaatagatgagctggtacgggagatctcagaaaatatgggc
gatcataaagccctgatcttctcccagtttttgggaatgctggggcttatccggcaaaaa
atggatgaactgggcattaaatacgaatattttgacggaagcacttctgcgccggatcgt
gaaaaagcgattcaaagctttcagaaaaatgaagaagtacgggtattcctgatctcgtta
aaagccggcggggtggggctcaaccttaccgcggcagattatgtttacatcgtagatccc
tggtggaacccggcagtggaacaacaggcgatcgaccgtacgcaccggatcgggcaaaca
aaaaatatttttgcttatcgtatgatttgtaaggataccattgaagacaagatccttaaa
ttacaggataagaaaaaagcattggcaaaagaccttatttctgatgaatcgggatttgta
aaatcattaaccagggaagatgtggaatatctatttagttaa
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