Niabella soli: NIASO_15170
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Entry
NIASO_15170 CDS
T03682
Name
(GenBank) RNA polymerase
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
nso
Niabella soli
Pathway
nso02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nso00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NIASO_15170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nso03021
]
NIASO_15170
Transcription machinery [BR:
nso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NIASO_15170
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
Sigma70_ECF
GerE
HTH_23
DUF722
HTH_11
UPF0122
VasI
DUF6115
HTH_38
HU-CCDC81_euk_2
HTH_24
RPA_C
Ribosomal_L17
HTH_20
HTH_29
DUF1492
Motif
Other DBs
NCBI-ProteinID:
AHF16128
UniProt:
W0F2V4
LinkDB
All DBs
Position
complement(3306292..3306912)
Genome browser
AA seq
206 aa
AA seq
DB search
MIDDEGLLLSISRGDEIALGRFFDLYKAKVYGYLLSFVKLQEVAEELTLDVFLKIWQKKE
LLAEVKEPAAFLFVISKHKALDFLKAAARNARLQQLITDHITNASQSEQAQTSIAKHLEQ
KELITQLLNELSPQRKEILILSRLEGLSHVEIAQKLKISRNTVKNTITQTLRHLERVFNG
NSIETCWIVFILGGVFLLMIQEIFLQ
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgattgatgatgaaggtctattgctttctatttccaggggagatgaaattgctcttggc
cgattttttgatctgtataaagccaaagtatatggctacttactgtcctttgtaaaattg
caggaagtggcagaagaacttaccctggatgtgtttcttaagatctggcaaaaaaaagaa
ctgttagcggaggttaaagagccggctgcctttctctttgttatttcgaaacacaaggca
ttggattttttaaaagctgccgcccgcaacgcccgcctgcaacaattaatcacggatcat
attaccaacgcatctcaaagcgagcaggctcagacaagcattgcaaaacatctggagcaa
aaagagctcattacgcaattgttaaatgagctatcgccgcaacgaaaggaaattctgatc
ctaagccgtttggaagggctctctcatgttgagatcgcccaaaagctgaagatttcacgc
aatactgtaaaaaatactattacccaaaccctcaggcatctggagcgggtttttaatggt
aacagcattgaaacctgctggattgttttcatacttgggggcgtttttttgctgatgata
caagaaatttttttgcaatag
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