Niabella soli: NIASO_18010
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Entry
NIASO_18010 CDS
T03682
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nso
Niabella soli
Pathway
nso03420
Nucleotide excision repair
nso03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nso00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NIASO_18010
03430 Mismatch repair
NIASO_18010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nso03400
]
NIASO_18010
Enzymes [BR:
nso01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NIASO_18010
DNA repair and recombination proteins [BR:
nso03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NIASO_18010
MMR (mismatch excision repair)
Other MMR factors
NIASO_18010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_12
AAA_11
ResIII
ARM_ECM29_C
TPR_ESP1
PCRF
Motif
Other DBs
NCBI-ProteinID:
AHF16552
UniProt:
W0F0L8
LinkDB
All DBs
Position
3967403..3969754
Genome browser
AA seq
783 aa
AA seq
DB search
MQDYLAGLNERQKEAVLYTDGPLMIIAGAGSGKTKVLTTRIAHLMAKGVDAFHILALTFT
NKAAREMKERVERILGNNDARNLYIGTFHSVFARVLRAEAHRIGYPNSFTIYDTDDAKSV
VKTVINEMQLDDKLYKPATIYNRISSAKNALVTPLDYVNDYYLQQEDMRANRPAIAKIYD
AYCKRCFKNGAMDFDDLLLKFYELLKTFPDVLSKYQHKFRYIMIDEYQDTNPAQYEIVKL
LGAMNENVCVVGDDAQSIYSFRGATIQNILQFQKDYDEVKVVKLEQNYRSTQNIIHVANE
VIRNNKAQIPKVLFTENQGGEKIRIVQTMTDNDEGKFVADTIQEQKLRNHFSNKDFAILY
RTNAQSRAFEESLRRMGIAYTMYGGISFYQRKEIKDLVGYLRLIVNPRDEEALKRIINYP
VRGIGKTTIDKILLAANTHNITMWEVLEKADQFGFRSGTLGIIQDFVILIRSCASMLKQH
NAYDVAFHVGKQTNLVKELFNDKSTEGLQRYENIQELLNSIKEWVESPDNDEGEVVDKSL
GAYLQQITLLTDSDNKDPDADTVKLMTIHAAKGLEFACVFAAGLEEMLFPNAMSINTREE
LEEERRLFYVVVTRAKEKLWISYANTRYKFGSLVQNDPSRFISELPPEYIDNSYSGGGTR
QSSFGYGNTGAAYERMSGGWGSSRFDAATKFGPAPSKKTVPEYLGSKPEAKKVVEHKPSV
DFQASDSSDIAVGQRVEHQKFGFGEVLKLEGNQHNKMAVIKFDSNGEKKILLNYARLKIL
SKN
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgcaggattatttagctggattgaatgaacgacagaaagaggccgtactgtacacggat
ggcccgttgatgattatagccggtgcgggcagcggaaaaacaaaagtactcaccacccgc
attgcccatttaatggcaaaaggggtggatgcctttcacatcctggcgctgacctttacc
aataaagccgcacgcgagatgaaggagcgggtggaacgcatccttggcaacaatgatgcg
cggaatctttatatcggaacctttcacagtgtatttgcaagagtgttgcgcgcagaggcg
catcgcatcgggtatcccaatagttttaccatttatgacacggacgatgccaaaagcgtg
gtaaaaaccgttattaatgaaatgcaactggatgacaaactgtataagcccgccactata
tataatcggatctcttcggcaaagaatgccctggttacacccctggattatgtgaacgac
tattacctgcagcaggaagatatgcgggccaaccgcccggccattgccaaaatatatgat
gcgtattgcaaacgctgcttcaaaaacggggcgatggattttgatgacctgttgctgaag
ttctatgaattgctgaaaacctttccggacgtactaagcaaataccagcacaagttccgg
tatattatgattgatgagtaccaggataccaaccccgcacaatatgagattgtaaaattg
ttaggggccatgaacgagaatgtgtgcgtggtgggggatgatgcgcaaagcatttacagc
tttcgcggcgctactattcagaatatcctgcagtttcagaaagattatgatgaggtaaaa
gtggtaaaactggaacagaattaccgcagtacccaaaatatcatacatgttgccaacgaa
gtgatacggaacaacaaagcgcaaatcccaaaagtgctgtttaccgagaatcagggcggg
gagaagataaggatcgtgcaaacgatgacagataacgatgagggaaaatttgtggcagat
acgatccaggagcagaagctgcggaaccatttctccaacaaggattttgccattctttat
cgcacgaatgcacaaagccgcgccttcgaggaatccttaaggcgcatggggattgcttac
actatgtacggaggtattagtttttaccagcgcaaagagatcaaagacctggtggggtat
ctgcggctgatcgtaaacccgcgtgatgaagaagcgttaaaacgtatcatcaactatccg
gtgcgcggtatcggcaaaacaacgatcgacaaaatattgctggccgccaatacccataat
attaccatgtgggaagtactggaaaaagcagatcagtttggcttccggtccggcacattg
ggtatcattcaggatttcgtgatcctgatcagaagttgtgccagtatgctgaaacagcac
aatgcctacgacgtggcttttcatgtaggcaagcaaacgaacctggtaaaagaactgttc
aatgataaaagcaccgaggggttgcaacgctatgaaaatatccaggagctgctcaattca
atcaaagaatgggtcgaaagcccggacaacgacgaaggggaagtagtagataaaagcctg
ggcgcctatctgcagcagatcaccctattgacagattcagataataaggatcctgacgcg
gatacggtaaaactgatgaccattcacgcagccaaagggcttgagtttgcctgtgtattt
gccgcaggtctggaggaaatgttgtttcctaatgccatgagcattaacaccagggaggaa
ctggaggaagaacgtcgtttgttctatgtggtagtaacaagggccaaggaaaaactatgg
atctcttatgccaatacgcgctacaaattcggatcgctggtgcaaaacgatcccagccgg
tttatcagtgagctgcccccggaatatatcgacaatagctattccggtggcggcaccagg
cagagctcatttggctatggaaataccggcgctgcttatgaacgcatgagcggcggatgg
ggcagtagtcgtttcgatgctgccacaaaatttggtcctgctccatcaaaaaaaaccgta
ccggagtacctgggctccaaacccgaagcaaaaaaagtagtggagcacaagccttcggtc
gattttcaggccagcgatagtagcgatatcgccgtaggccaacgggtggagcaccagaaa
ttcggttttggcgaagtgctgaaactggaagggaaccaacataataaaatggctgtaatt
aaatttgacagcaacggcgaaaagaaaattctgctcaactacgcgcggcttaaaatctta
agcaaaaactaa
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