Niabella soli: NIASO_20160
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Entry
NIASO_20160 CDS
T03682
Name
(GenBank) alpha-rhamnosidase
KO
K05989
alpha-L-rhamnosidase [EC:
3.2.1.40
]
Organism
nso
Niabella soli
Pathway
nso00946
Degradation of flavonoids
nso01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nso00001
]
09100 Metabolism
09110 Biosynthesis of other secondary metabolites
00946 Degradation of flavonoids
NIASO_20160
Enzymes [BR:
nso01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.40 alpha-L-rhamnosidase
NIASO_20160
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Bac_rhamnosid6H
Bac_rhamnosid_N
Bac_rhamnosid
Bac_rhamnosid_C
fn3
Motif
Other DBs
NCBI-ProteinID:
AHF16868
UniProt:
W0F500
LinkDB
All DBs
Position
4480237..4482960
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AA seq
907 aa
AA seq
DB search
MRFRFILFFVGVAFAARAQLQVQNLTIEQQASPIGIATLQPRFSWQLSSDKRGVKQTAYE
ILVASSKAALEKNIGDVWSSGTVKSDNTLFVHFSGSSLQVNRYYYVKVKVITNKGEEAWS
KPVFFTVGLVKQSEWKAKWIGHDGGFGWDSITQWSRLSARYFRKEFPVAKKIKKAFVNIV
GLGMYSLLINGKKIGDAVLTPAPTDYRKTVLSNTYDVTEHITTGNNAVGVVLGNGRFFTM
RQNYKPYKINNFGFPKLLFQLDIIYEDGTNETIVSDQSWKFTADGPIRTNNEYDGEEYDA
TKELGAWSSVNYDAAKWIQPQLVAAPAGQVRPQPNPSMKVMEKIQPKSINRLRDGIYILD
MGQNFAGWLQIKVNGKKGDKVKMRFAESLQPDGALYVANLRDAKVTDMYTLNGGGEEVWH
PQFVYHGFRYVEISGWPGTPDVSDFEGQLVYDQMQTAGQLTTSNATINQVVKNAWWGIAS
NYKGMPVDCPQRNERQPWLGDRAQGAYGESFLFNNAAFYAKWLDDIEAAQTAAGAIPDVA
PAFWNYYSDNVTWPGTYILVAEMLRQQFDDTQSIIKHYPSMKKWMLYMKNRYMKDFIVTK
DKYGDWCVPPEDLKMIRSQDSTRTTKGALLATAYYYRLLGLMQNFAAIAGHPSDGAEYAR
LKENIRTAFNKKFFRADSNQYDNGTVTANLLPWYFGMVPEDKKQAVFTNIIKKLNADKMH
ISTGVIGTQWLMRGLTQNGRSDAAYTLASNKTYPSWGYMVENGATTIWELWNGNTANPQM
NSQNHIMLLGDLMIWLFEDLAGIKSKAQGFKEIEMKPAFRNDENISAAYKSVRGEIVSNW
TQENGKLKWTITIPANTVARIYVPAKSRKEVKESGRMIDEKNAVKFITMSGGDAIFEMGS
GIYHFTN
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgcggttcagatttatactgttttttgttggcgttgcttttgctgcccgggcccagctt
caggtgcaaaatcttacaatagagcagcaggcctccccaattggtattgctactttacaa
ccgcgctttagctggcaactaagctcagataaaagaggggtaaaacaaactgcttatgaa
atactggtggcaagctctaaagcggctcttgaaaagaacataggtgatgtatggtcgtcc
ggaacagtgaaaagcgataacacattgtttgtgcattttagcggaagttcattacaagtc
aaccggtattattatgtaaaagtgaaagtgattacaaataaaggcgaagaagcgtggagt
aagcctgtgttttttacagttggattggtaaagcagtcagaatggaaagcaaaatggatt
gggcacgacgggggctttgggtgggatagcattacacagtggtcgcggctttcggcgagg
tattttcgaaaagaattccccgtcgccaaaaaaattaaaaaagcttttgtaaatatcgtt
gggctgggtatgtattcgttactgatcaatggtaaaaaaataggcgatgcagtgctgacg
ccggccccgaccgattatcgtaaaactgtactaagtaatacttacgatgtgacggaacat
attactaccggcaataatgccgtgggcgtggtattagggaatggccgcttcttcaccatg
cgccaaaattataagccgtataaaataaacaattttggctttccgaagctattgtttcaa
ttggatattatttatgaagatggaacgaatgaaacaattgtttccgatcaaagctggaag
tttacggcagatggacctattcgtaccaataacgaatatgatggcgaggaatatgatgct
acaaaggagttaggagcctggtcgtcggtaaattatgatgctgccaaatggatacagccg
cagctcgttgcggcgcctgcagggcaagtgcggccacagcccaatccttctatgaaagtg
atggaaaaaattcagcctaagtccattaacagattgagggatggcatttacattttagat
atggggcagaattttgctggctggctgcagatcaaagtgaacggtaaaaaaggcgataag
gtaaaaatgcgttttgctgagagcctgcagccggacggtgccttatatgttgccaatctc
agggatgcaaaagtgacagatatgtataccttaaacggcgggggagaagaagtctggcac
ccgcagtttgtgtatcatggtttccggtatgtggaaataagcggctggccgggaacgccc
gatgtgagcgactttgaaggacaactggtgtatgaccagatgcaaacggcgggacagtta
acaacctccaatgcaaccatcaaccaggttgtaaagaatgcctggtggggcattgcgtcc
aattataaggggatgccggtagattgcccgcaacggaacgagcgccaaccctggctgggc
gacagggcgcagggcgcatacggggaaagctttttgttcaataatgcagcgttttatgca
aaatggttagatgacattgaagcagctcaaacggcagcaggagccatacccgatgtggcg
cctgctttctggaattattatagtgataatgttacctggccgggtacctatattttggtt
gccgaaatgttgcgccagcaatttgacgatacccaaagcatcattaaacattatccgtcc
atgaaaaaatggatgctatatatgaagaaccggtacatgaaagattttattgttacaaaa
gataaatatggcgactggtgtgtaccgcctgaagatctgaaaatgatccgctcgcaggat
agcacccgaactacaaaaggggccttgctggccacagcgtattattacaggcttttgggg
ctgatgcaaaacttcgcagccatagcaggccatccttccgacggcgctgagtacgcccgg
ctgaaagaaaatatccggacggcatttaataagaaattcttcagggccgacagcaaccag
tatgacaacggcacggttacggccaacctccttccctggtattttgggatggttcctgaa
gataaaaagcaagcggtttttaccaatatcattaaaaagcttaatgcagataaaatgcat
atcagcaccggggtgatcggcacacagtggctcatgcgcgggcttacgcagaatggtcgc
tccgatgcggcgtataccctggcatccaataaaacctacccgagctggggctatatggtt
gaaaacggtgccacaactatttgggagctatggaatggaaataccgccaacccacagatg
aattctcaaaatcatattatgctgctgggcgatctgatgatttggctgtttgaggatctc
gcaggtattaaatcaaaggcgcagggctttaaagaaattgagatgaaaccggcctttaga
aatgatgaaaacatttcggcagcgtataaaagcgtaagaggcgagatcgtcagtaactgg
actcaggaaaacggaaaactaaaatggaccattacgataccggccaatacagtagcaagg
atatacgttccggcaaaatccaggaaagaggtaaaagaatccggaaggatgattgatgaa
aagaatgctgttaaatttataaccatgagtgggggcgatgccatatttgagatgggcagc
ggcatttatcactttacaaattaa
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