Niabella soli: NIASO_20440
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Entry
NIASO_20440 CDS
T03682
Name
(GenBank) RNA polymerase subunit sigma-24
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
nso
Niabella soli
Pathway
nso02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nso00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NIASO_20440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nso03021
]
NIASO_20440
Transcription machinery [BR:
nso03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NIASO_20440
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_24
GerE
Motif
Other DBs
NCBI-ProteinID:
AHF16917
UniProt:
W0F1M7
LinkDB
All DBs
Position
complement(4559438..4560025)
Genome browser
AA seq
195 aa
AA seq
DB search
MKRLDLPYLTRLVAEQSDENAFNELLRYYYPGLLSFANSILNDRSLAEEVIQDIFVQLWE
NKKTLPAINSLSNYLYIAVKYACFGHLKKKKRVCYNEFGESFAVAYTHSDSKMLSNENLK
FIADAVNKLPPKCRLIFRLIKDEGLKYNEVAGILDLSIKTVEAQMTIALKSLAKTLEAAF
PEYKNNFFIKKSRSS
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgattggatttaccctatttgacgaggctggttgcagaacagagcgatgaaaat
gcttttaatgaactgcttagatactattacccggggttattgtcctttgcaaactctatc
cttaacgatcgttcgctggcagaagaagtgatccaggatatatttgtacaactatgggaa
aataaaaaaacattgcccgccattaatagtctctctaattatttatatatagcggttaaa
tatgcctgtttcgggcacctgaaaaaaaagaagcgggtatgttataatgaatttggagaa
tcatttgcggtggcgtacacccactccgactcaaaaatgttgagcaatgaaaacctgaag
ttcattgctgatgccgtaaataaattacctccgaaatgcaggctgatcttccggctgatc
aaagatgagggactgaaatacaatgaggtggccggtattttagatctctcgataaaaaca
gtagaagcccaaatgaccattgcattaaaaagccttgccaaaaccctggaagctgctttc
ccggaatataaaaacaacttctttataaaaaaatccaggtcatcttaa
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