Nodularia spumigena: BMF81_00115
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Entry
BMF81_00115 CDS
T05403
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
nsp
Nodularia spumigena
Pathway
nsp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BMF81_00115 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nsp03400
]
BMF81_00115 (uvrB)
DNA repair and recombination proteins [BR:
nsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BMF81_00115 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BMF81_00115 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
HerA_C
AAA_16
AAA
Motif
Other DBs
NCBI-ProteinID:
AVZ29483
UniProt:
A0A2S0Q521
LinkDB
All DBs
Position
complement(121806..123803)
Genome browser
AA seq
665 aa
AA seq
DB search
MTGFCLQAPFIPTGDQPQAIAQLTSSIQSGNRYQTLLGATGTGKTFSIAAVIEKVGRPTL
VLAHNKTLAAQLCNELREFFPHNAVEYFVSYYDYYQPEAYIPVSDTYIEKTSSINDEIDM
LRHSATRSLFERRDVIVVASISCIYGLGIPSEYLKAAIPFQIGMEVNQRQILRDLASVQY
SRNDIEMGRGRFRVRGDVLEIGPAYEDRIIRVEFFGDEIDAIRYIDPVTGEIIRSLEAVN
VYPARHFVTPQERLEIACDEIAAELKQQQAQLEQAGKLLEAQRIDQRTRYDLEMLREVGF
CNGVENYSRHLAGREAGAPPECLIDYFPKDWLLVIDESHVTVPQIRGMYNGDQARKKVLI
DHGFRLPSAADNRPLKAEEFWQKVNQCIFVSATPGDWELEISEGHIADQIIRPTGVIDPE
ISVRPTEGQIDDLLGEIKDRVDLQERVLITTLTKRMAEDLTEYLQDHNIKVRYLHSEINS
IERIEILQDLRAGKFDVLVGVNLLREGLDLPEVSLVAIMDADKEGFLRAERSLIQTIGRA
ARHIRGQAIMYADNMTGSMIKAIDETDRRRGIQMAYNRTHGITPQPIIKRSSNAILSFLD
VSRRLNATDLKVVDEHIDELPLEEIPGLIGKLEAQMKDAAKKLEFEEAGKLRDRIKHLRD
KMLGR
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atgacaggattttgtcttcaagctccctttattcccacaggcgaccaaccacaagcgatc
gcacaactaaccagcagtatccaatctggcaatcgttaccaaactttactaggcgcgacg
ggaaccggtaaaacattttccatagccgcagtcattgaaaaagtgggtagaccgactttg
gtactagcccataataaaactttagcagcacaactgtgtaacgaattgcgagaattcttt
cctcataacgcagttgagtattttgtcagctactacgattactatcagccagaagcctat
attccggttagcgatacttatattgaaaaaacatcttcgattaatgatgaaatagatatg
ttacggcattcagcgacgcgatcgctctttgaacgccgtgatgtaattgtagtggcttcc
attagctgtatctacggcttggggattccctcagaatacctcaaagccgccatccctttc
caaatcgggatggaagtcaaccaacgtcaaattttacgagatttggcatcagtacagtat
agccgcaacgacatagaaatgggtcggggacgttttcgcgtccggggtgatgtcttagaa
attggtcccgcctacgaagaccgaattattcgtgtagaattctttggcgatgaaatagac
gcgattcgttatatcgaccccgtgacaggggaaattatccgcagtttggaagctgtaaac
gtttacccagcgcgtcactttgtcaccccacaagaacgcttagaaatagcttgtgatgaa
attgcagccgaattaaagcagcaacaagcacaactagaacaagcaggaaaattattagaa
gcacaacgcatagaccaacgcacacgctatgacttggaaatgttgcgcgaagttggtttc
tgtaacggcgtagaaaactattctcgccacttagcaggaagagaagccggcgcaccccca
gagtgtttaattgattattttcccaaagattggctgttagttatcgatgaatctcacgtt
acagtaccccaaattcgcggtatgtataacggcgaccaagccagaaaaaaagttttaatt
gatcatggatttcgacttcccagtgctgctgataacagaccgttaaaagcagaagaattt
tggcaaaaagtaaatcagtgcatttttgtttccgctacaccaggagattgggaattagaa
atatctgaaggtcatattgctgaccaaataattcgaccgactggggtaattgatccagaa
atttccgtgcgtcccacagaaggacaaattgatgatttattaggcgaaattaaagacaga
gttgaccttcaagagcgagtgttaattaccacattaacgaagcgcatggcggaagatttg
acggagtatctgcaagaccataatataaaagtccgttatttgcattcagagattaattcc
attgaacgcatcgagattttgcaagatttacgtgcgggtaaatttgatgttttggtgggt
gtgaacttgttacgggaaggcttagacttaccagaagtttccttagtggcaattatggat
gcagataaagaaggctttttacgcgccgagcgttctttaattcaaactattgggagagca
gcacggcacatcagaggacaagcaattatgtatgctgataatatgacaggcagcatgatt
aaagccattgatgaaacagatagaaggcggggaattcagatggcttataatcggacgcat
ggaattacaccgcaaccgattattaagagatcgagtaatgcaattttatcttttttagat
gtttcccggcgattaaatgcgactgatttaaaagtggttgatgaacatatagatgaactg
cctttagaagaaattccagggttgattgggaagttagaagcacagatgaaagatgcagct
aagaaattggaatttgaagaggcgggaaaattacgcgatcgcatcaagcatctgcgcgat
aaaatgctagggcgttaa
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