Nodularia spumigena: BMF81_01107
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Entry
BMF81_01107 CDS
T05403
Symbol
clpC
Name
(GenBank) ATP-dependent Clp protease ATP-binding subunit ClpC
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
nsp
Nodularia spumigena
Brite
KEGG Orthology (KO) [BR:
nsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
nsp03110
]
BMF81_01107 (clpC)
Chaperones and folding catalysts [BR:
nsp03110
]
Heat shock proteins
HSP100
BMF81_01107 (clpC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
ClpB_D2-small
AAA
AAA_5
AAA_22
AAA_16
Sigma54_activat
nSTAND3
AAA_14
IstB_IS21
UVR
Mg_chelatase
AAA_18
AAA_28
TniB
RNA_helicase
AAA_24
RuvB_N
AAA_7
ResIII
Zeta_toxin
DNA_pol3_delta2
Torsin
T2SSE
Com_YlbF
ARM_KDM8_N
Motif
Other DBs
NCBI-ProteinID:
AVZ29998
UniProt:
A0A2S0Q6L0
LinkDB
All DBs
Position
complement(1332186..1334639)
Genome browser
AA seq
817 aa
AA seq
DB search
MFEHFTSEAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGVAAKVLAELGVTLKEAR
REVEKIIGRGSGFVPPEIPFTPKVKSLFEQSFREANSLGHNYINTEHLLLGLTEAGEGVA
AKVLQNLGVDLKNVRTNVIRRLGEGGTVFASTGSSSKRSQSVTLEEFGRNLTKLAQEGKL
DPVVGRAKEIERTIQILGRRTKNNPVLIGEPGVGKTAIAEGLAQRIVNQDAPEILLDKQV
ISLDMGMVVSGTRFRGDFEERLKKIVEEVRSAGNIILVIDEVHTLVGAGGTEGGLDAANI
LKPALARGELQCIGATTLNEYRQHIERDAALERRFQSILIGEPSVEETVEILYGLRGAYE
QHHKVHISDQAVLAAAELSDRYISDRFLPDKAIDLIDEAGSRVRLRNSRISTNKELKKQL
VGVSKAKQEAVRVQNFGKAGELRDEEMKLEADLQAEAQNEDFVKSPIVDEEDIAQIVASW
TGVPVNKLTESESELLLHLEDTLHERLIGQEQAVTAVSRAIRRARVGLKNPNRPIASFIF
SGPTGVGKTELAKSLASYFFSSEEAMIRLDMSEYMEGHTVSKLIGSPPGYVGYDDGGQLT
EAVRRKPYSVILFDEIEKAHPDVFNMLLQLLDDGHLTDAKGRKVDFKNTLIILTSNIGSK
VIEKGGGGLGFDFETAADASYNRIRTLVNEELKAYFRPEFLNRLDDIIVFTQLAKDEVKQ
IADIMLREIASRLTEKGITLEVTERFKERVVEEGYNPSYGARPLRRAIMRLLEDPLAEAM
LSGQVTEGVTAIADIDDDNQVTIHGSEKRELLLANAG
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacacttcacttccgaagccattaaagtaattatgttagcccaggaggaagca
cgccgcctaggacacaatttcgtaggaactgagcaaattctcctgggactaattggagaa
gggactggggttgctgctaaagtactggccgaattgggtgtaactctcaaggaagcacgc
cgcgaagtcgaaaaaattatcggtagaggttctggctttgtaccaccagaaattcctttt
actcccaaggtgaaaagcttattcgagcaatcctttcgagaagccaacagtctgggacat
aactacatcaacactgaacacttactcttaggattaaccgaggctggtgaaggtgtcgcc
gccaaagtcctccaaaatctaggggttgaccttaagaacgtccgcacaaacgtcatccgc
cgtttgggtgaaggtggaactgtttttgcgagtacaggtagtagctccaagcgcagccaa
agcgtgactctagaggaatttggcagaaatctgactaaattagctcaggaaggcaagctt
gaccctgtagttggtcgagccaaagaaattgagcgtaccatccaaattctcggtcgtcgg
acaaagaataatcctgtattgattggtgaaccaggagttgggaaaactgcgatcgccgaa
ggtctagctcaacgcattgtcaatcaagatgcaccggaaatcttgctagataagcaagtt
atcagtcttgatatgggcatggtagtatctggaacccgttttcgtggtgactttgaagaa
cgcctgaagaaaattgtcgaagaagttcgttctgctggcaatatcattctggtgattgac
gaagttcacaccttagttggtgcgggtggtacagaaggcggtttagatgcagccaatatc
ctcaaacctgccttagcacgcggtgaactccagtgtattggtgcaaccactctgaatgaa
tatcgtcagcatattgagcgtgatgcggctttagagcgtcgtttccaatcaattctgatc
ggggaaccatcagtagaagaaactgtggaaattctctacggattgcgcggagcttatgag
cagcaccacaaagtccatatttctgatcaagctgtactcgcagccgccgagctgtcagac
cgttatattagcgatcgctttttaccagataaagcaattgacctaattgatgaagctggt
tctcgtgtgcgcctgcggaactcgcggatttcgactaataaagaactcaagaagcaatta
gtcggtgtgagtaaagccaaacaggaagcagtcagagtccagaattttggcaaagctgga
gaactgcgcgacgaggaaatgaaactcgaagccgatctgcaagctgaagcacaaaatgag
gattttgtcaagtcacccatcgtcgatgaggaagacattgctcaaattgtcgcctcttgg
acaggagtaccagtcaacaaactcaccgaatcagagtcagagttgctgctgcacctagaa
gacacactccacgagcggttaattggtcaagaacaagcagttacagccgtatctcgcgcc
attcgtcgcgccagagtcgggttaaaaaatcccaatcgtcccattgctagttttattttc
tctggacctaccggagttggtaaaacagagttagcaaaatctttggcatcttacttcttt
agcagtgaagaagcgatgattcgcctagatatgtccgagtacatggaaggacatacagtt
tccaagctgattggttcacctcctggttacgtaggatacgacgatggcggacaactaaca
gaagccgtgcgccgcaaaccatactcagtgattctcttcgacgaaatcgaaaaagcgcat
cctgacgtatttaatatgctgctgcaactcttagatgacggacacctcaccgatgcgaaa
ggtcggaaagtggacttcaagaacaccctaattattctgacttccaacattggttctaag
gtaattgaaaaaggtggtggtggtttaggctttgactttgagactgcggccgatgcaagc
tataaccgcattcgtaccttagtgaatgaagaactgaaagcttacttccgtccggaattt
ctcaaccgcttggatgatattatcgtcttcacccaacttgctaaagatgaagtcaagcaa
attgctgatattatgctccgcgaaattgctagccgcttgactgaaaaaggcatcacttta
gaagttacagaacgctttaaagagcgtgtagtggaagaaggctataaccccagttacggt
gcgagaccgttacgccgagcaattatgcggttgttagaagaccctctggctgaagcaatg
ctttctggtcaagtcaccgagggagttacagccattgcggatattgatgatgacaatcag
gtaacaatacatggctcagaaaagcgagaattactcttagctaatgctggctag
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