Nodularia spumigena: BMF81_01187
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Entry
BMF81_01187 CDS
T05403
Symbol
treX
Name
(GenBank) isoamylase
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
nsp
Nodularia spumigena
Pathway
nsp00500
Starch and sucrose metabolism
nsp01100
Metabolic pathways
nsp01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
nsp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
BMF81_01187 (treX)
Enzymes [BR:
nsp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
BMF81_01187 (treX)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CBM_48
Alpha-amylase
Isoamylase_C
Motif
Other DBs
NCBI-ProteinID:
AVZ30035
UniProt:
A0A2S0Q5N3
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Position
complement(1421301..1423451)
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AA seq
716 aa
AA seq
DB search
MYLSLWPGKPYPLGATWDGKGTNFALFSENATGVELCLFDQQDRETRLTLTEISNFTWHC
YVPSIVPGQRYGFRVHGPFNPQEGHRFNPNKLLIDPYAKALDGEIGFGEEMFGYPWDDPQ
ADLGFSELDDAHLVPKAVVVDESFDWEGDELLQTPWHETVIYETHVKGFTKLHPAIPAKL
RGTYAGLAHLASISHLQSLGVTAVELMPVHHYLAYPRHLVDTGLRNYWGYDSICYLAPYH
GYSANSGHGEQVKEFKEMVKALHKAGMEVILDVVYNHTGEGNNLGPTLSLRGIDNTSYYR
LVDGNARYYMDFTGCGNSLNVRHPQVLKLIMDSLRYWVLEMHVDGFRFDLASALARELFA
VDRLAAFFDIIHQDPVLADVKLIAEPWDVGEGGYQVGEFPLLWSEWNGRYRDTVRDFWRG
EDSSLAEFAYRFTGSSDLYQLNGRNPSASINFITAHDGFTLNDLVSYNQKHNEANGEDCR
DGENHNRSWNCGVEGETNDPVISKLRKQQRRNFLATLLLSQGVPMLVMGDEMGRSQGGNN
NAYCQDNEVSWLDWDLPEENEALLDFTRQLIDFRRKHPVFRRRKWFQGRAIHGSGVHDIG
WFNPDGQQMTEQQWNEGFTKAIGIFMNGEEIATPGPRGERIMDDSFLWFFNAHHEMLEFV
IPKGLQNWEWLTIIDTTKPRFVQRGKRYIDDKPISVAGRSLVVLQRLGRALFENEE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctctctctggcctggtaaaccctatcctttaggagcaacttgggatggtaaa
ggcactaactttgctctattttcagaaaacgccacaggggttgaattgtgcctgtttgac
cagcaagacagagaaactagactaactctcacagaaattagtaattttacttggcattgc
tacgtcccctctatcgtccctggtcagcgatacggatttagggtacacggtccctttaac
ccccaggaagggcatcgctttaaccccaacaagctgctgatagacccctacgccaaagca
cttgacggcgaaatcggttttggggaagaaatgtttggctatccctgggatgatcctcaa
gcagatttgggattttcggaactggatgacgcgcacctcgtaccaaaagcggtggtggtg
gatgagtcctttgattgggaaggagatgaactgctgcaaacaccttggcacgaaacggta
atttatgaaacccacgtcaaaggttttaccaagctgcacccagcaattcccgccaaactc
cgaggaacctatgctggactagctcatctcgccagtatttcccatctccagtctttgggt
gtgacagctgtggaattgatgcctgtgcatcattatctcgcatatccccgacatttagtc
gatacagggctgagaaattactggggttatgactctatctgctatctagctccttaccac
ggttatagtgctaattctggtcatggcgagcaggtaaaagagtttaaggagatggtgaag
gcactacacaaagccggaatggaggtgattttagatgtagtttacaaccacactggggaa
ggtaataatttagggccgactttatctctgcgagggatagataatacctcttattatcgc
ctagtagatggtaacgctcgttattatatggacttcaccggttgcggtaattctttgaat
gtgcgccatccgcaggtgctgaaactgattatggatagtctgcgttactgggtgctggaa
atgcacgttgatggtttccggtttgacttggcttcggctttggcgcgggaacttttcgca
gttgacaggctggctgctttctttgatattattcaccaagacccggttttagctgatgtg
aaattgattgcagaaccttgggatgtaggggaaggtggctatcaagtgggggaatttcct
ttgctgtggtcggaatggaatggtagatatagggatactgtgcgggacttctggcgaggt
gaagatagtagtttggcagagtttgcttatcggtttacgggtagttctgacctgtatcag
ttaaacggacgcaatccgagcgctagtattaactttatcacagcccacgatggttttact
ctcaatgatttagttagttacaaccagaagcacaatgaggcgaatggggaagactgtcgg
gatggggaaaatcataatcgctcttggaattgtggcgtagaaggagaaacgaatgacccg
gtaatcagcaagttacggaagcagcaacggcgaaactttctcgcaactttactgctttcc
caaggtgtcccgatgctggtgatgggtgatgaaatggggcggagtcaaggcgggaacaat
aacgcttattgccaagataatgaagtttcctggttagattgggatttaccagaagaaaat
gaagcgctgttagattttacccgtcagctgattgattttcgccgcaagcatccagttttt
cgcagacgcaagtggttccaaggtagagctatccacggttctggggtacatgatattggt
tggttcaatcccgatggtcagcagatgactgaacaacagtggaatgaaggttttactaag
gctattggtatctttatgaatggtgaagaaatagcgactcctgggccacggggggaacga
attatggatgattcctttttgtggttttttaatgctcaccatgaaatgttggagtttgtg
attcccaaagggttacagaactgggaatggctgactattattgatacaactaagccacgc
tttgtacaacgtggtaaacgttacatcgatgataaaccaatttctgtggcagggcgatcg
cttgtggttttacagcgtttgggtagagctttatttgagaatgaagagtaa
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