Nodularia spumigena: BMF81_01552
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Entry
BMF81_01552 CDS
T05403
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nsp
Nodularia spumigena
Pathway
nsp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nsp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BMF81_01552 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsp03021
]
BMF81_01552 (rpoA)
03400 DNA repair and recombination proteins [BR:
nsp03400
]
BMF81_01552 (rpoA)
Enzymes [BR:
nsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BMF81_01552 (rpoA)
Transcription machinery [BR:
nsp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BMF81_01552 (rpoA)
DNA repair and recombination proteins [BR:
nsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BMF81_01552 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
AVZ30214
UniProt:
A0A2S0Q746
LinkDB
All DBs
Position
complement(1837747..1838694)
Genome browser
AA seq
315 aa
AA seq
DB search
MAQFQIECVESNTEESRSHYSKFVLEPLERGQGTTVGNALRRVLLSNLEGTAVTAVRIAG
VSHEFATVPGVREDVLEILMKMKEVILRSYSSQPQIGRLLVNGPATVTVAHFDLPSEVEV
IDQTQYVATLAEGGKLEMEFRIEKGKGYRTVERGREEATSLDFLQIDSVFMPVRKVNYSV
EEARGESSIPKDRLLLEVWTNGSISPQEALSSAAGILVELFNPLKDISLEPTETGAEVPD
DPTAQIPIEELQLSVRAYNCLKRAQVNSVADLLDFTQEDLLEIKNFGQKSAEEVVEALQR
RLGITLPQERGTKHT
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcagtttcaaattgaatgtgtagagtctaatactgaggaaagtcggagccattac
agtaaatttgtgctggaacctctagagcgtggtcaaggaacaacagttggcaacgcgctg
cggcgggttttactgtcgaatctagaggggacagcagttacagcagtgagaattgccggt
gtcagccacgagtttgctacagttccgggtgtgcgggaagacgtgctggaaatcctcatg
aaaatgaaggaagtaatcctcagaagctattcttctcaaccccagattggcagattactc
gttaatgggccagcaacagtcaccgtggctcattttgatttgcccagtgaagtagaagtt
atagaccaaacccagtatgtcgctaccttagctgagggcggcaaactggaaatggaattt
cggattgagaaaggtaaaggatatcgcacagtagagcgaggacgcgaagaagccacttcc
ttggactttctgcaaatcgactcggtatttatgccagtccggaaagttaactacagtgtc
gaagaagcccgtggtgaaagctcaattcctaaagacaggttgctgttagaagtttggaca
aatggcagtatttcgccccaagaagcactatcatcagcagctggtattctggtagagcta
ttcaatccattgaaagatatttcactggaacccacagaaacaggtgccgaagtcccagac
gaccccaccgcccaaattcccattgaagagttacagctatctgtacgggcttataactgt
ctcaaacgcgcacaagttaactctgtggccgatttgttagatttcactcaagaagacttg
ttagaaattaaaaactttggtcagaagtcagcagaagaggtagttgaagccttacagcgc
cgtttaggtattaccctgccccaagaaagaggcactaaacacacataa
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