Nodularia spumigena: BMF81_01870
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Entry
BMF81_01870 CDS
T05403
Symbol
rsmD
Name
(GenBank) ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
nsp
Nodularia spumigena
Brite
KEGG Orthology (KO) [BR:
nsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nsp03009
]
BMF81_01870 (rsmD)
Enzymes [BR:
nsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
BMF81_01870 (rsmD)
Ribosome biogenesis [BR:
nsp03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
BMF81_01870 (rsmD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cons_hypoth95
Methyltr_RsmB-F
Methyltransf_25
DUF2817
DUF4142
Methyltransf_24
Motif
Other DBs
NCBI-ProteinID:
AVZ30366
UniProt:
A0A2S0Q0W4
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Position
complement(2164179..2164751)
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AA seq
190 aa
AA seq
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MTLRIYGNRQIKTLSGQATRPTSARVREAVFNIWQGEITGCCWLDVCTGSGSMGAEALCR
GASLVVGIEKSSQASAIIQQNWQQVAHGEQKWQLLRGDVMQQLKKLSGKQFDKIYFDPPY
ASGLYQPVLEAIAHYDLLAVHGEIAVEHNPQGWTPPVIPTWEICRQKVYGNTALTFYRIM
DEPNEAEGIH
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgacactgagaatttacgggaatcgccaaattaaaactttatcagggcaagctaccaga
cccaccagtgccagggtcagggaggcagtgtttaatatatggcagggagaaattactggg
tgttgttggctagatgtgtgtactggtagtggttcaatgggtgcagaggctttgtgtaga
ggagccagtttagtagtagggatagaaaaatcaagccaagcgagtgccattattcaacaa
aactggcaacaagtggcgcatggtgagcaaaaatggcaactcttgcgaggagatgtcatg
cagcaattaaaaaagttatcaggaaagcagtttgacaaaatttactttgatccaccttat
gctagtggattatatcagcctgttttagaggcgatcgcacattatgatttattagctgtg
catggtgaaatagctgtagaacataatccccaaggttggacaccgcccgtcatccccacc
tgggagatttgccgccaaaaggtttacggtaataccgcgctgactttttatagaattatg
gatgagccgaatgaagccgaaggtatacattga
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