Nodularia spumigena: BMF81_02138
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Entry
BMF81_02138 CDS
T05403
Symbol
rpoC_2
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nsp
Nodularia spumigena
Pathway
nsp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nsp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BMF81_02138 (rpoC_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nsp03021
]
BMF81_02138 (rpoC_2)
03400 DNA repair and recombination proteins [BR:
nsp03400
]
BMF81_02138 (rpoC_2)
Enzymes [BR:
nsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BMF81_02138 (rpoC_2)
Transcription machinery [BR:
nsp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BMF81_02138 (rpoC_2)
DNA repair and recombination proteins [BR:
nsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BMF81_02138 (rpoC_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
Cas9-BH
Motif
Other DBs
NCBI-ProteinID:
AVZ30505
UniProt:
A0A2S0Q729
LinkDB
All DBs
Position
complement(2460206..2462083)
Genome browser
AA seq
625 aa
AA seq
DB search
MRPAQTNQFDYVKIGLASPERIRQWGERTLPNGQLVGEVTKPETINYRTLKPEMDGLFCE
RIFGPAKDWECHCGKYKRVRHRGIVCERCGVEVTESRVRRHRMGYIKLAAPVAHVWYLKG
IPSYISILLDMPLRDVEQIVYFNSYVVLSPGNAETLSYKQLLSEDQWLEIEDQIYSEDSL
LQGVEVGIGAEALLRLLADINLEQEAENLREEIGNAKGQKRAKLIKRLRVIDNFIATGSK
PEWMVMAVIPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLARLQEILAPEIIVR
NEKRMLQEAVDALIDNGRRGRTVVGANNRPLKSLSDIIEGKQGRFRQNLLGKRVDYSGRS
VIVVGPKLKIHQCGLPREMAIELFQPFVINRLIRSGMVNNIKAAKKLISRNDPSVWDVLE
EVIEGHPVMLNRAPTLHRLGIQAFEPVLVEGRAIQLHPLVCPAFNADFDGDQMAVHVPLS
LESQAEARLLMLASNNVLSPATGRPIITPSQDMVLGAYYLTAENPAATKGMGKYYASMDD
VIMAFQQDQVDLHAYVYVRFDGDVESEKPDTEPLEVTENVDGTRTLLYKSRRIREDAQGN
LISQYVHTTPGRVIYNKAIEEALAV
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagacccgcccaaactaatcagtttgactacgttaaaatcggcttggcatcaccggaa
cgcatcaggcagtggggtgagcgcactttacctaatggtcagctagttggtgaagtcacc
aagccagaaacaattaattaccggactctgaaaccagagatggacggcttattttgcgag
cgcatctttggcccagctaaagactgggaatgccattgtggtaaatataagagagttcgt
caccgtggtattgtctgcgagcgctgtggtgtggaagtcaccgagtcgcgggtgcgtcgt
caccgcatgggatacattaaactcgccgccccagtcgcccacgtttggtatcttaaaggt
attcccagctacatctccattctgctagatatgcccttgcgggatgtagagcagatagtc
tatttcaactcttatgttgtcctgagtcctggtaatgcggaaacattaagttataagcag
ctactcagtgaagaccaatggttggaaattgaagaccaaatatatagtgaagattctctg
ttgcagggcgtagaagtaggcattggcgctgaagcgttgctgcgtttgctggcagatatt
aatttggagcaagaagcggagaacctgcgcgaagaaattggcaacgctaaagggcagaag
cgagccaaactaattaaacgtctccgggtaatagacaacttcatcgccaccggttcaaaa
ccagaatggatggtaatggcagtcattcccgtaattccccctgacctgcggccaatggta
cagctggatggtggacggtttgctaccagtgatttaaatgacttgtatcgccgggtaatt
aaccggaataatcgtttggcacggttgcaagaaattttagcaccagagattattgtgcgg
aacgaaaagcggatgctgcaagaagcagtggatgctttaattgacaatggtcgtcgggga
cgcacagtagtaggggcaaataaccgacctctgaagtctttatctgacatcattgagggt
aaacaaggacgtttccggcaaaacttgttgggtaaacgggttgactattctggacgttct
gtaattgtcgtgggaccgaaactgaaaattcaccagtgcggtttacccagagaaatggcc
attgagttatttcaaccctttgtgattaatcgcctgattcgtagcggtatggtgaataat
atcaaagccgccaaaaagttgatttctcgcaatgaccccagtgtgtgggatgtcctagaa
gaggtgattgaaggacacccggtgatgctcaaccgtgcgccaactctgcaccgcttgggt
attcaggcttttgaaccggttttggtggaaggacgcgcaattcaattacatcccttggta
tgtccagcctttaacgctgactttgacggcgaccaaatggcggtacacgtgcctctgtct
ctagaaagtcaggcggaagcgcggttgttgatgctggcttctaataatgttttgtccccg
gctacaggtagaccaattattacacctagccaagatatggttttgggagcatattactta
acagccgaaaaccctgctgcgactaagggtatgggtaagtattatgcctcaatggatgac
gtaattatggctttccaacaagaccaagtggacttacacgcttatgtttacgtgcggttt
gatggtgacgtggaatcggaaaaaccagatacagagccgttggaagtcacagaaaacgtt
gatggaacccggactttgctgtataagtctcgccgcatcagagaagatgcccaagggaat
ttaatttctcagtatgtacatacaacacctggtcgtgttatttacaacaaagccattgaa
gaagcattagcagtttaa
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